| 913 | |
| 914 | #[test] |
| 915 | fn test_plot_cigar_match() { |
| 916 | let cigar_string = CigarStringView::new(CigarString::from(vec![Cigar::Match(10)]), 0); |
| 917 | let reference = vec!['A', 'A', 'G', 'C', 'T', 'A', 'T', 'A', 'T', 'A']; |
| 918 | let read = vec!['A', 'A', 'G', 'C', 'C', 'A', 'T', 'A', 'T', 'A']; |
| 919 | let cigar = PlotCigar::from_cigar(cigar_string, read, reference).unwrap(); |
| 920 | let expected_cigar = PlotCigar(vec![ |
| 921 | InnerPlotCigar { |
| 922 | cigar_type: CigarType::Match, |
| 923 | bases: None, |
| 924 | length: Some(4), |
| 925 | }, |
| 926 | InnerPlotCigar { |
| 927 | cigar_type: CigarType::Sub, |
| 928 | bases: Some(vec!['C']), |
| 929 | length: Some(1), |
| 930 | }, |
| 931 | InnerPlotCigar { |
| 932 | cigar_type: CigarType::Match, |
| 933 | bases: None, |
| 934 | length: Some(5), |
| 935 | }, |
| 936 | ]); |
| 937 | assert_eq!(cigar, expected_cigar); |
| 938 | } |
| 939 | |
| 940 | #[test] |
| 941 | fn test_plot_cigar_insertion() { |