Placeholder for Cell Ranger highly variable gene detection. The Cell Ranger method follows a similar approach to Seurat but with modifications specific to the 10x Genomics processing pipeline. This implementation is planned for future development. ## TODO - Implement Cell Ranger-specific normalization - Add proper mean-variance modeling for 10x data - Include Cell Ranger-specific parameter handl
(
_adata: &IMAnnData,
_x: &IMArrayElement,
_params: HVGParams,
)
| 582 | /// - Add proper mean-variance modeling for 10x data |
| 583 | /// - Include Cell Ranger-specific parameter handling |
| 584 | fn compute_cell_ranger_hvg( |
| 585 | _adata: &IMAnnData, |
| 586 | _x: &IMArrayElement, |
| 587 | _params: HVGParams, |
| 588 | ) -> anyhow::Result<()> { |
| 589 | todo!("Cell Ranger flavor is not implemented yet!") |
| 590 | } |
| 591 | |
| 592 | /// Compute highly variable genes using Support Vector Regression (SVR). |
| 593 | /// |
no outgoing calls
no test coverage detected