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Function resolve_reference_group

src/memory/processing/diffexp/mod.rs:850–869  ·  view source on GitHub ↗

Resolve the reference group specification to an actual group name or "rest" mode. Handles three cases: - Specific group name: validates the group exists - "rest": use all cells not in the test group as reference - None: automatically use "rest" mode # Arguments `all_groups` - Complete list of available groups `reference` - User-specified reference group or None # Returns - `Some(group_name)` fo

(
    all_groups: &[String],
    reference: Option<&str>,
)

Source from the content-addressed store, hash-verified

848/// - `Some(group_name)` for specific reference group
849/// - `None` for "rest" mode (use all other cells)
850fn resolve_reference_group(
851 all_groups: &[String],
852 reference: Option<&str>,
853) -> anyhow::Result<Option<String>> {
854 match reference {
855 Some(ref_group) => {
856 if ref_group == "rest" {
857 Ok(None)
858 } else {
859 let ref_group_string = ref_group.to_string();
860 if all_groups.contains(&ref_group_string) {
861 Ok(Some(ref_group_string))
862 } else {
863 Err(anyhow::anyhow!("Reference group '{}' not found", ref_group))
864 }
865 }
866 }
867 None => Ok(None),
868 }
869}
870
871/// Get row indices for cells belonging to a specific group.
872///

Callers 1

compute_rank_gene_groupsFunction · 0.85

Calls

no outgoing calls

Tested by

no test coverage detected