Class DicomSeriesReader

Examples/DicomSeriesReader/DicomSeriesReader.java:21–49

import org.itk.simple.*;

public class DicomSeriesReader {
  public static void main(String[] args) {

    if (args.length < 2) {
      System.out.println("Usage: DicomSeriesReader <input_directory> <output_file>");
      System.exit(1);
    }

    System.out.println("Reading Dicom directory: " + args[0]);

    ImageSeriesReader imageSeriesReader = new ImageSeriesReader();
    final VectorString dicomNames = ImageSeriesReader.getGDCMSeriesFileNames(args[0]);
    imageSeriesReader.setFileNames(dicomNames);

    Image image = imageSeriesReader.execute();

    VectorUInt32 size = image.getSize();
    System.out.println("Image size: " + size.get(0) + " " + size.get(1) + " " + size.get(2));

    System.out.println("Writing " + args[1]);

    SimpleITK.writeImage(image, args[1]);

    if (System.getenv("SITK_NOSHOW") == null) {
      SimpleITK.show( image, "Hello World: Java", true );
    }

  }
}