Method test

src/test/java/com/rtg/mode/ProteinTest.java:54–70

Test method for com.rtg.mode.Protein(). @throws InvocationTargetException @throws IllegalAccessException @throws IllegalArgumentException @throws NoSuchMethodException @throws SecurityException

()

   * @throws SecurityException
   */
  public final void test() throws IllegalArgumentException, IllegalAccessException, InvocationTargetException, SecurityException, NoSuchMethodException {
    // Check toString of values
    final String methodName = "values";
    Method m = Protein.class.getMethod(methodName);
    final Protein[] r = (Protein[]) m.invoke(null);
    assertEquals("[X, *, A, R, N, D, C, Q, E, G, H, I, L, K, M, F, P, S, T, W, Y, V]", Arrays.toString(r));
    final String valueOfMethod = "valueOf";
    m = Protein.class.getMethod(valueOfMethod, String.class);
    // Check ordinal and valueOf
    for (int i = 0; i < r.length; ++i) {
      assertEquals(i, r[i].ordinal());
      if (r[i] != Protein.STOP) {
        assertEquals(r[i], m.invoke(null, r[i].toString()));
        assertEquals(Protein.valueOf(r[i].toString()), r[i]);
      }
    }
  }

  //Copied  from the IUPAC page
  private static final String STR = ""