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hub / github.com/RealTimeGenomics/rtg-tools / isMissingGt

Method isMissingGt

src/main/java/com/rtg/vcf/VcfUtils.java:448–450  ·  view source on GitHub ↗

If all sub-alleles of the GT is missing return true. @param gt GT to check @return true if gt should be skipped, false otherwise

(int[] gt)

Source from the content-addressed store, hash-verified

446 * @return true if gt should be skipped, false otherwise
447 */
448 public static boolean isMissingGt(int[] gt) {
449 return !isNonMissingGt(gt);
450 }
451
452 /**
453 * If all sub-alleles of the GT is missing return true.

Callers 3

mergeSamplesMethod · 0.95
referenceFixMethod · 0.95
checkMendeliannessMethod · 0.95

Calls 1

isNonMissingGtMethod · 0.95

Tested by

no test coverage detected