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hub / github.com/RealTimeGenomics/rtg-tools / setQuality

Method setQuality

src/main/java/com/rtg/vcf/VcfRecord.java:265–268  ·  view source on GitHub ↗

@param qual set quality values @return this, for call chaining

(String qual)

Source from the content-addressed store, hash-verified

263 * @return this, for call chaining
264 */
265 public VcfRecord setQuality(String qual) {
266 mQual = qual;
267 return this;
268 }
269
270 /**
271 * @return true if the record has failed filters

Callers 15

testGetQualValuesMethod · 0.95
testQualMethod · 0.95
testUpdateQualMethod · 0.95
createTestRecordMethod · 0.95
testMethod · 0.95
parseFieldsMethod · 0.95
makeRecordMethod · 0.95
toVcfRecordMethod · 0.95
testQualCleanerMethod · 0.80
createRecordMethod · 0.80
testNoRedundantAltMethod · 0.80

Calls

no outgoing calls

Tested by 15

testGetQualValuesMethod · 0.76
testQualMethod · 0.76
testUpdateQualMethod · 0.76
createTestRecordMethod · 0.76
testMethod · 0.76
testQualCleanerMethod · 0.64
createRecordMethod · 0.64
testNoRedundantAltMethod · 0.64
testOneRedundantAltMethod · 0.64
testPhasingAndPloidyMethod · 0.64
testBrokenPipeMethod · 0.64
testMethod · 0.64