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Functions634 in github.com/QVina/qvina

⨍ Functions 634◇ Types & classes 142

↓ 1 callersMethodeval_conf_independent

src/lib/terms.cpp:303

↓ 1 callersMethodeval_deriv

src/lib/non_cache.cpp:82

↓ 1 callersMethodeval_deriv

src/lib/model.cpp:658

↓ 1 callersMethodevale

src/lib/terms.cpp:185

↓ 1 callersMethodevale_robust

src/lib/terms.cpp:239

↓ 1 callersMethodevali

src/lib/terms.cpp:221

↓ 1 callersMethodexternal_too_close

src/lib/conf.h:353

↓ 1 callersFunctionextrapolate_cap

src/lib/manifold.cpp:81

↓ 1 callersMethodfind_ligand

src/lib/model.cpp:420

↓ 1 callersFunctiongaussian

src/lib/everything.cpp:26

↓ 1 callersMethodgenerate

src/lib/conf.h:124

↓ 1 callersFunctiongenerate_external

src/lib/manifold.cpp:64

↓ 1 callersMethodgenerate_external

src/lib/conf.h:376

↓ 1 callersMethodgenerate_internal

src/lib/conf.h:368

↓ 1 callersFunctionget_atom_range

src/lib/model.cpp:28

↓ 1 callersMethodget_movable_atom_types

src/lib/model.cpp:487

↓ 1 callersFunctionget_occurrence

src/main/main.cpp:377

↓ 1 callersMethodgyration_radius

src/lib/model.cpp:587

↓ 1 callersMethodindex_permissive

src/lib/matrix.h:79

↓ 1 callersMethodinit_from_smooth_fst

src/lib/precalculate.h:53

↓ 1 callersMethodinsert_immobile

insertion into non_rigid_parsed

src/lib/parse_pdbqt.cpp:217

↓ 1 callersMethodinsert_immobile_inflex

inflex insertion

src/lib/parse_pdbqt.cpp:207

↓ 1 callersMethodinsert_immobiles

src/lib/parse_pdbqt.cpp:185

↓ 1 callersMethodinsert_immobiles_inflex

src/lib/parse_pdbqt.cpp:172

↓ 1 callersMethodinteresting

src/lib/visited.cpp:74

↓ 1 callersMethodinternal_too_close

src/lib/conf.h:346

↓ 1 callersMethodis_heteroatom

src/lib/atom_type.h:45

↓ 1 callersFunctionis_non_ad_metal_name

src/lib/atom_constants.h:240

↓ 1 callersMethodligand_length

src/lib/model.cpp:74

↓ 1 callersFunctionline_search

src/lib/bfgs.h:67

↓ 1 callersMethodlocal_to_lab

src/lib/tree.h:31

↓ 1 callersMethodlocal_to_lab_direction

src/lib/tree.h:36

↓ 1 callersFunctionmain_procedure

src/main/main.cpp:295

↓ 1 callersFunctionmanifold_phase

src/lib/manifold.cpp:93

↓ 1 callersFunctionmax_covalent_radius

src/lib/atom_constants.h:295

↓ 1 callersFunctionmean

src/lib/statistics.h:32

↓ 1 callersFunctionmerge_output_containers

src/lib/parallel_mc.cpp:53

↓ 1 callersFunctionmetropolis_accept

src/lib/monte_carlo.cpp:35

↓ 1 callersFunctionmutate_conf

does not set model

src/lib/mutate.cpp:35

↓ 1 callersFunctionmy_pid

src/lib/my_pid.cpp:31

↓ 1 callersMethodnum_degrees_of_freedom

src/lib/conf.h:41

↓ 1 callersMethodnum_internal_pairs

src/lib/model.cpp:480

↓ 1 callersMethodnum_other_pairs

src/lib/model.h:78

↓ 1 callersFunctionomit_whitespace

src/lib/parse_pdbqt.cpp:58

↓ 1 callersFunctionpairwise_clash_penalty

src/lib/model.cpp:856

↓ 1 callersFunctionparse_bundle

src/main/main.cpp:395

↓ 1 callersFunctionparse_multimodel_pdbqt

src/split/split.cpp:65

↓ 1 callersFunctionparse_one_unsigned

src/lib/parse_pdbqt.cpp:238

↓ 1 callersFunctionparse_pdbqt_branch

src/lib/parse_pdbqt.cpp:523

↓ 1 callersFunctionparse_pdbqt_flex

src/lib/parse_pdbqt.cpp:495

↓ 1 callersFunctionparse_pdbqt_ligand

src/lib/parse_pdbqt.cpp:471

↓ 1 callersFunctionparse_pdbqt_residue

src/lib/parse_pdbqt.cpp:490

↓ 1 callersFunctionparse_pdbqt_root

src/lib/parse_pdbqt.cpp:312

↓ 1 callersFunctionparse_pdbqt_root_aux

src/lib/parse_pdbqt.cpp:286

↓ 1 callersFunctionpearson

src/lib/statistics.h:63

↓ 1 callersMethodpopulate

src/lib/cache.cpp:206

↓ 1 callersFunctionpostprocess_ligand

src/lib/parse_pdbqt.cpp:442

↓ 1 callersFunctionpostprocess_residue

src/lib/parse_pdbqt.cpp:449

↓ 1 callersMethodprint

src/lib/visited.h:63

↓ 1 callersFunctionquaternion_difference

src/lib/quaternion.cpp:135

↓ 1 callersFunctionrandom_in_box

src/lib/random.cpp:78

↓ 1 callersFunctionrandom_orientation

src/lib/quaternion.cpp:113

↓ 1 callersFunctionrandom_sz

src/lib/random.cpp:55

↓ 1 callersFunctionremove_redundant

src/main/main.cpp:149

↓ 1 callersMethodrmsd_lower_bound

src/lib/model.cpp:747

↓ 1 callersFunctionrmsd_upper_bound

src/lib/coords.cpp:25

↓ 1 callersMethodrmsd_upper_bound

src/lib/model.cpp:752

↓ 1 callersMethodsame_element

src/lib/atom_type.h:56

↓ 1 callersFunctionselect_rs

src/lib/manifold.cpp:37

↓ 1 callersMethodset_range

src/lib/model.cpp:78

↓ 1 callersFunctionset_rotor

src/lib/parse_pdbqt.cpp:379

↓ 1 callersMethodsete

src/lib/model.cpp:576

↓ 1 callersMethodseti

src/lib/model.cpp:572

↓ 1 callersFunctionstring_to_ad_type

src/lib/atom_constants.h:285

↓ 1 callersFunctionstring_to_pdb_atom

src/lib/pdb.cpp:45

↓ 1 callersFunctionsubstring_is_blank

src/lib/convert_substring.h:50

↓ 1 callersFunctionsubtract_change

src/lib/bfgs.h:91

↓ 1 callersMethodtoo_close

src/lib/conf.h:364

↓ 1 callersFunctionvector_append

src/lib/common.h:252

↓ 1 callersMethodwiden

src/lib/precalculate.h:148

↓ 1 callersMethodwrite_model

src/lib/model.h:107

↓ 1 callersFunctionwrite_multimodel_pdbqt

src/split/split.cpp:122

↓ 1 callersMethodwrite_structure

src/lib/model.h:96

↓ 1 callersFunctionxs_h_bond_possible

src/lib/atom_constants.h:275

FunctionVINA_FOR

src/lib/statistics.h:73

FunctionVINA_FOR

src/lib/manifold.cpp:124

src/lib/precalculate.h:57

FunctionVINA_FOR_IN

src/lib/pdb.cpp:29

FunctionVINA_FOR_IN

src/lib/cache.cpp:117

MethodVINA_FOR_IN

no sub-branches besides immobile atom, including sub-sub-branches, etc

src/lib/parse_pdbqt.cpp:227

MethodVINA_FOR_IN

returns by value

src/lib/conf.h:267

MethodVINA_FOR_IN

torsions are not normalized after this

src/lib/conf.h:369

MethodVINA_FOR_IN

returned if smooth.empty()

src/lib/precalculate.h:75

MethodVINA_FOR_IN

src/lib/terms.h:119

MethodVINA_FOR_IN

src/lib/model.cpp:298

MethodVINA_RANGE

src/lib/tree.h:75

FunctionVINA_U_FOR

src/lib/monte_carlo.cpp:93

FunctionVINA_U_FOR

src/lib/ssd.cpp:29

FunctionVINA_U_FOR

src/lib/bfgs.h:75

FunctionVINA_U_FOR

src/lib/manifold.cpp:67

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