Initialize the connectivity and limit the labels for which holes are filled. Args: keys: keys of the corresponding items to be transformed. See also: :py:class:`monai.transforms.compose.MapTransform` applied_labels (Optional[Union[Iterable[in
(
self,
keys: KeysCollection,
applied_labels: Iterable[int] | int | None = None,
connectivity: int | None = None,
allow_missing_keys: bool = False,
)
| 350 | backend = FillHoles.backend |
| 351 | |
| 352 | def __init__( |
| 353 | self, |
| 354 | keys: KeysCollection, |
| 355 | applied_labels: Iterable[int] | int | None = None, |
| 356 | connectivity: int | None = None, |
| 357 | allow_missing_keys: bool = False, |
| 358 | ) -> None: |
| 359 | """ |
| 360 | Initialize the connectivity and limit the labels for which holes are filled. |
| 361 | |
| 362 | Args: |
| 363 | keys: keys of the corresponding items to be transformed. |
| 364 | See also: :py:class:`monai.transforms.compose.MapTransform` |
| 365 | applied_labels (Optional[Union[Iterable[int], int]], optional): Labels for which to fill holes. Defaults to None, |
| 366 | that is filling holes for all labels. |
| 367 | connectivity (int, optional): Maximum number of orthogonal hops to consider a pixel/voxel as a neighbor. |
| 368 | Accepted values are ranging from 1 to input.ndim. Defaults to a full |
| 369 | connectivity of ``input.ndim``. |
| 370 | allow_missing_keys: don't raise exception if key is missing. |
| 371 | """ |
| 372 | super().__init__(keys, allow_missing_keys) |
| 373 | self.converter = FillHoles(applied_labels=applied_labels, connectivity=connectivity) |
| 374 | |
| 375 | def __call__(self, data: Mapping[Hashable, NdarrayOrTensor]) -> dict[Hashable, NdarrayOrTensor]: |
| 376 | d = dict(data) |