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Method read

monai/data/wsi_reader.py:725–737  ·  view source on GitHub ↗

Read whole slide image objects from given file or list of files. Args: data: file name or a list of file names to read. kwargs: additional args for the reader module (overrides `self.kwargs` for existing keys). Returns: whole slide image

(self, data: Sequence[PathLike] | PathLike | np.ndarray, **kwargs)

Source from the content-addressed store, hash-verified

723 return self.reader._get_patch(wsi=wsi, location=location, size=size, level=level, dtype=dtype, mode=mode)
724
725 def read(self, data: Sequence[PathLike] | PathLike | np.ndarray, **kwargs):
726 """
727 Read whole slide image objects from given file or list of files.
728
729 Args:
730 data: file name or a list of file names to read.
731 kwargs: additional args for the reader module (overrides `self.kwargs` for existing keys).
732
733 Returns:
734 whole slide image object or list of such objects.
735
736 """
737 return self.reader.read(data=data, **kwargs)
738
739
740@require_pkg(pkg_name="cucim")

Callers 15

test_read_whole_imageMethod · 0.95
test_get_wsi_at_mppMethod · 0.95
test_read_regionMethod · 0.95
test_read_rgbaMethod · 0.95
test_read_malformatsMethod · 0.95
test_resolution_mppMethod · 0.95
test_errorsMethod · 0.95
versions_from_fileFunction · 0.45

Calls

no outgoing calls

Tested by 11

test_read_whole_imageMethod · 0.76
test_get_wsi_at_mppMethod · 0.76
test_read_regionMethod · 0.76
test_read_rgbaMethod · 0.76
test_read_malformatsMethod · 0.76
test_resolution_mppMethod · 0.76
test_errorsMethod · 0.76