| 79 | } |
| 80 | |
| 81 | void TIC::addMetaDataMetricsToMzTab(OpenMS::MzTabMetaData& meta, vector<TIC::Result>& tics) |
| 82 | { |
| 83 | // Adding TIC information to meta data |
| 84 | for (Size i = 0; i < tics.size(); ++i) |
| 85 | { |
| 86 | if (tics[i].intensities.empty()) |
| 87 | { |
| 88 | continue; // no MS1 spectra |
| 89 | } |
| 90 | MzTabParameter tic {}; |
| 91 | tic.setCVLabel("total ion current"); |
| 92 | tic.setAccession("MS:1000285"); |
| 93 | tic.setName("TIC_" + String(i + 1)); |
| 94 | String value("["); |
| 95 | value += String(tics[i].retention_times[0], false) + ", " + String((UInt64)tics[i].intensities[0]); |
| 96 | for (Size j = 1; j < tics[i].intensities.size(); ++j) |
| 97 | { |
| 98 | value += ", " + String(tics[i].retention_times[j], false) + ", " + String((UInt64)tics[i].intensities[j]); |
| 99 | } |
| 100 | value += "]"; |
| 101 | tic.setValue(value); |
| 102 | meta.custom[meta.custom.size()] = tic; |
| 103 | } |
| 104 | } |
| 105 | } // namespace OpenMS |
no test coverage detected