Method loadDataProcessing_

src/openms/source/FORMAT/OMSFileLoad.cpp:829–872

  void OMSFileLoad::loadDataProcessing_(vector<DataProcessing>& data_processing)
  {
    if (!db_->tableExists("FEAT_DataProcessing")) return;

    // "position" column was removed in schema version 3:
    String order_by = version_number_ > 2 ? "id" : "position";
    SQLite::Statement query(*db_, "SELECT * FROM FEAT_DataProcessing ORDER BY " + order_by + " ASC");

    SQLite::Statement subquery_info(*db_, "");
    bool have_meta_info = prepareQueryMetaInfo_(subquery_info, "FEAT_DataProcessing");

    while (query.executeStep())
    {
      DataProcessing proc;
      Software sw(query.getColumn("software_name").getString(),
                  query.getColumn("software_version").getString());
      proc.setSoftware(sw);
      vector<String> actions =
        ListUtils::create<String>(query.getColumn("processing_actions").getString());
      for (const String& action : actions)
      {
        auto pos = find(begin(DataProcessing::NamesOfProcessingAction),
                          end(DataProcessing::NamesOfProcessingAction), action);
        if (pos != end(DataProcessing::NamesOfProcessingAction))
        {
          Size index = pos - begin(DataProcessing::NamesOfProcessingAction);
          proc.getProcessingActions().insert(DataProcessing::ProcessingAction(index));
        }
        else // @TODO: throw an exception here?
        {
          OPENMS_LOG_ERROR << "Error: unknown data processing action '" << action << "' - skipping";
        }
      }
      DateTime time;
      time.set(query.getColumn("completion_time").getString());
      proc.setCompletionTime(time);
      if (have_meta_info)
      {
        Key id = query.getColumn("id").getInt64();
        handleQueryMetaInfo_(subquery_info, proc, id);
      }
      data_processing.push_back(proc);
    }
  }


  BaseFeature OMSFileLoad::makeBaseFeature_(int id, SQLite::Statement& query_feat,