Method generateMzTabSectionRow_

src/openms/source/FORMAT/MzTabFile.cpp:2082–2196

  }

  String MzTabFile::generateMzTabSectionRow_(
    const MzTabProteinSectionRow& row, 
    const vector<String>& optional_columns,
    const MzTabMetaData& meta, 
    size_t& n_columns) const
  {
  StringList s;
  s.push_back("PRT");
  s.push_back(row.accession.toCellString());
  s.push_back(row.description.toCellString());
  s.push_back(row.taxid.toCellString());
  s.push_back(row.species.toCellString());
  s.push_back(row.database.toCellString());
  s.push_back(row.database_version.toCellString());
  s.push_back(row.search_engine.toCellString());

  for (map<Size, MzTabDouble>::const_iterator it = row.best_search_engine_score.begin(); it != row.best_search_engine_score.end(); ++it)
  {
    s.push_back(it->second.toCellString());
  }

  for (std::map<Size, std::map<Size, MzTabDouble> >::const_iterator it = row.search_engine_score_ms_run.begin(); it != row.search_engine_score_ms_run.end(); ++it)
  {
    for (std::map<Size, MzTabDouble>::const_iterator sit = it->second.begin(); sit != it->second.end(); ++sit)
    {
      s.push_back(sit->second.toCellString());
    }
  }

  if (store_protein_reliability_)
  {
    s.push_back(row.reliability.toCellString());
  }

  for (std::map<Size, MzTabInteger>::const_iterator it = row.num_psms_ms_run.begin(); it != row.num_psms_ms_run.end(); ++it)
  {
    s.push_back(it->second.toCellString());
  }

  for (std::map<Size, MzTabInteger>::const_iterator it = row.num_peptides_distinct_ms_run.begin(); it != row.num_peptides_distinct_ms_run.end(); ++it)
  {
    s.push_back(it->second.toCellString());
  }

  for (std::map<Size, MzTabInteger>::const_iterator it = row.num_peptides_unique_ms_run.begin(); it != row.num_peptides_unique_ms_run.end(); ++it)
  {
    s.push_back(it->second.toCellString());
  }

  s.push_back(row.ambiguity_members.toCellString());
  s.push_back(row.modifications.toCellString());

  if (store_protein_uri_)
  {
    s.push_back(row.uri.toCellString());
  }

  if (store_protein_goterms_)