| 46 | } |
| 47 | |
| 48 | void CVMappingFile::startElement(const XMLCh* const /*uri*/, const XMLCh* const /*local_name*/, const XMLCh* const qname, const Attributes& attributes) |
| 49 | { |
| 50 | |
| 51 | tag_ = String(sm_.convert(qname)); |
| 52 | |
| 53 | if (tag_ == "CvReference") |
| 54 | { |
| 55 | // CvReference cvName="PSI-PI" cvIdentifier="PSI-PI"/> |
| 56 | CVReference ref; |
| 57 | ref.setName(attributeAsString_(attributes, "cvName")); |
| 58 | ref.setIdentifier(attributeAsString_(attributes, "cvIdentifier")); |
| 59 | cv_references_.push_back(ref); |
| 60 | return; |
| 61 | } |
| 62 | |
| 63 | if (tag_ == "CvMappingRule") |
| 64 | { |
| 65 | // id="R1" cvElementPath="/psi-pi:MzIdentML/psi-pi:AnalysisSoftwareList/psi-pi:AnalysisSoftware/pf:ContactRole/pf:role/pf:cvParam" requirementLevel="MUST" scopePath="" cvTermsCombinationLogic="OR |
| 66 | actual_rule_.setIdentifier(attributeAsString_(attributes, "id")); |
| 67 | String element_path = attributeAsString_(attributes, "cvElementPath"); |
| 68 | if (strip_namespaces_) |
| 69 | { |
| 70 | vector<String> slash_split; |
| 71 | element_path.split('/', slash_split); |
| 72 | if (slash_split.empty()) |
| 73 | { |
| 74 | slash_split.push_back(element_path); |
| 75 | } |
| 76 | element_path = ""; |
| 77 | for (vector<String>::const_iterator it = slash_split.begin(); it != slash_split.end(); ++it) |
| 78 | { |
| 79 | if (it->empty()) |
| 80 | { |
| 81 | continue; |
| 82 | } |
| 83 | |
| 84 | vector<String> split; |
| 85 | it->split(':', split); |
| 86 | if (split.empty()) |
| 87 | { |
| 88 | element_path += "/" + *it; |
| 89 | } |
| 90 | else |
| 91 | { |
| 92 | if (split.size() == 2) |
| 93 | { |
| 94 | element_path += "/" + split[1]; |
| 95 | } |
| 96 | else |
| 97 | { |
| 98 | fatalError(LOAD, String("Cannot parse namespaces of path: '") + element_path + "'"); |
| 99 | } |
| 100 | } |
| 101 | } |
| 102 | } |
| 103 | actual_rule_.setElementPath(element_path); |
| 104 | CVMappingRule::RequirementLevel level = CVMappingRule::MUST; |
| 105 | String lvl = attributeAsString_(attributes, "requirementLevel"); |
nothing calls this directly
no test coverage detected