Function START_SECTION

src/tests/class_tests/openms/source/SqMassFile_test.cpp:140–172

TOLERANCE_RELATIVE(1.0005)

START_SECTION(void load(const String& filename, MapType& map))
{
  MSExperiment exp;
  SqMassFile().load(OPENMS_GET_TEST_DATA_PATH("SqliteMassFile_1.sqMass"), exp);

  MSExperiment exp2;
  MzMLFile().load(OPENMS_GET_TEST_DATA_PATH("MzMLSqliteHandler_1.mzML"),exp2);

  TEST_EQUAL(exp.getNrSpectra(), exp2.getSpectra().size())
  TEST_EQUAL(exp.getNrChromatograms(), exp2.getChromatograms().size())
  TEST_EQUAL(exp.getNrSpectra(), 2)
  TEST_EQUAL(exp.getNrChromatograms(), 1)
  TEST_EQUAL(exp.getSpectrum(0) == exp2.getSpectra()[0], false) // no exact duplicate

  cout.precision(17);

  // Logic of comparison: if the absolute difference criterion is fulfilled,
  // the relative one does not matter. If the absolute difference is larger
  // than allowed, the test does not fail if the relative difference is less
  // than allowed.
  // Note that the sample spectrum intensity has a very large range, from
  // 0.00013 to 183 838 intensity and encoding both values with high accuracy
  // is difficult.

  cmpDataIntensity(exp, exp2, 1e-4, 1.001);
  cmpDataMZ(exp, exp2, 1e-5, 1.000001);  // less than 1ppm error for m/z 
  cmpDataRT(exp, exp2, 0.05, 1.000001);  // max 0.05 seconds error in RT

  // mapping of experimental settings ...
  TEST_EQUAL(exp.getExperimentalSettings() == (OpenMS::ExperimentalSettings)exp2, true)
  TEST_EQUAL(exp.getSqlRunID(), exp2.getSqlRunID())

}
END_SECTION

// reset error tolerances to default values