Function checkData

src/tests/class_tests/openms/source/OSWFile_test.cpp:83–111

*/

void checkData(OSWData& res)
{
	const OSWProtein& prot = *res.getProteins().begin();
	TEST_EQUAL(prot.getAccession(), "1/P00167ups|CYB5_HUMAN_UPS");
	const OSWPeptidePrecursor& prec = *prot.getPeptidePrecursors().begin();
	TEST_EQUAL(prec.getCharge(), 2);
	TEST_EQUAL(prec.isDecoy(), false);
	TEST_REAL_SIMILAR(prec.getPCMz(), 1103.4676);
	TEST_EQUAL(prec.getSequence(), "EQAGGDATENFEDVGHSTDAR");
	TEST_EQUAL(prec.getFeatures().size(), 5);
	const std::vector<UInt32> tr{ 236830, 236831, 236832, 236833, 236834 };
	const auto& trd = prec.getFeatures().back().getTransitionIDs();
	TEST_TRUE(trd == tr);
	// check last transition
	const OSWProtein& prot_last = res.getProteins().back();
	TEST_EQUAL(prot_last.getPeptidePrecursors().back().getFeatures().back().getTransitionIDs().back(), 99);

	// all features should have 5 transitions
	for (const auto& prot : res.getProteins())
	{
		for (const auto& pc : prot.getPeptidePrecursors())
		{
			for (const auto& feat : pc.getFeatures())
			{
				TEST_EQUAL(feat.getTransitionIDs().size(), 5);
			}
		}
	}
}

START_TEST(OSWFile, "$Id$")