| 169 | } |
| 170 | |
| 171 | void Evaluator::evaluateOverRepSeqs() { |
| 172 | if(!mOptions->in1.empty()) |
| 173 | computeOverRepSeq(mOptions->in1, mOptions->overRepSeqs1, mOptions->seqLen1); |
| 174 | if(!mOptions->in2.empty()) |
| 175 | computeOverRepSeq(mOptions->in2, mOptions->overRepSeqs2, mOptions->seqLen2); |
| 176 | } |
| 177 | |
| 178 | void Evaluator::evaluateReadNum(long& readNum) { |
| 179 | FastqReader reader(mOptions->in1); |