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Functions5,508 in github.com/OpenChemistry/avogadrolibs

↓ 1 callersMethodcreateFileHighlighter
avogadro/molequeue/inputgenerator.cpp:343
↓ 1 callersFunctioncreateLabel
avogadro/qtplugins/label/labeleditor.cpp:120
↓ 1 callersMethodcubeFileName
avogadro/qtplugins/apbs/apbsdialog.cpp:71
↓ 1 callersMethodcurrentOption
avogadro/qtplugins/configurepython/configurepythondialog.cpp:225
↓ 1 callersFunctioncustomElementColor
avogadro/core/elements.cpp:91
↓ 1 callersFunctioncustomElementName
avogadro/core/elements.cpp:69
↓ 1 callersFunctioncustomElementSymbol
avogadro/core/elements.cpp:86
↓ 1 callersMethoddata
Retrieve a pointer to the underlying data. */
avogadro/core/array.h:152
↓ 1 callersMethoddataPointer
avogadro/io/hdf5dataformat.cpp:113
↓ 1 callersMethoddebug
avogadro/qtgui/interfacescript.cpp:64
↓ 1 callersMethoddenticity
avogadro/qtplugins/templatetool/templatetoolwidget.cpp:617
↓ 1 callersMethoddescription
avogadro/qtplugins/ply/ply.h:27
↓ 1 callersMethoddescription
tests/calc/energycalculatortest.cpp:41
↓ 1 callersMethoddeserialize
avogadro/qtplugins/label/label.cpp:134
↓ 1 callersFunctiondestroy_region
avogadro/qtplugins/qtaim/qtaimcubature.cpp:256
↓ 1 callersMethoddipoleMoment
avogadro/calc/chargemodel.cpp:26
↓ 1 callersMethoddisplayName
avogadro/qtplugins/packageinstaller/packagemodel.cpp:514
↓ 1 callersMethoddraw
avogadro/qtgui/toolplugin.cpp:49
↓ 1 callersMethodeditEdgeInPlace
avogadro/core/graph.cpp:381
↓ 1 callersMethodeditUnitCell
avogadro/qtplugins/crystal/crystal.cpp:197
↓ 1 callersMethodelectronDensitySources
avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.h:60
↓ 1 callersFunctionellipticityOfASymmetricThreeByThreeMatrix
avogadro/qtplugins/qtaim/qtaimmathutilities.cpp:73
↓ 1 callersFunctionend
avogadro/core/angleiterator.h:35
↓ 1 callersFunctionensureApp
tests/qtgui/fuzz-rwmolecule.cpp:23
↓ 1 callersFunctionensureApp
tests/qtgui/fuzz-generichighlighter.cpp:24
↓ 1 callersFunctionensureApp
tests/qtgui/fuzz-jsonwidget.cpp:20
↓ 1 callersFunctionensureApp
tests/qtgui/fuzz-interfacescript-json.cpp:30
↓ 1 callersMethodenvironmentName
avogadro/qtplugins/configurepython/condadialog.cpp:22
↓ 1 callersFunctionerrMax
avogadro/qtplugins/qtaim/qtaimcubature.cpp:172
↓ 1 callersFunctionerror
* Get the error(s), if any, encountered when setting up the GLWidget. * @return A free form string containing errors encountered. */
avogadro/qtopengl/glwidget.h:107
↓ 1 callersMethodestimateVelocities
avogadro/core/molecule.cpp:1389
↓ 1 callersFunctionevalR0_0fs4d
avogadro/qtplugins/qtaim/qtaimcubature.cpp:459
↓ 1 callersFunctionevalRR0_0fs
avogadro/qtplugins/qtaim/qtaimcubature.cpp:432
↓ 1 callersFunctionevalR_Rfs
* Evaluate the integration points for all 2^n points (+/-r,...+/-r) * * A Gray-code ordering is used to minimize the number of coordinate updates
avogadro/qtplugins/qtaim/qtaimcubature.cpp:403
↓ 1 callersMethodevaluateCalls
tests/calc/energycalculatortest.cpp:119
↓ 1 callersFunctionevaluateLennardJonesPairs
avogadro/calc/lennardjones.cpp:18
↓ 1 callersFunctionexportBasisSet
python/basisset.cpp:18
↓ 1 callersFunctionexportCube
python/cube.cpp:15
↓ 1 callersFunctionexportMolecule
python/molecule.cpp:24
↓ 1 callersMethodextract
Extract method from libarchive docs, changed to return QList of errors
avogadro/qtplugins/packageinstaller/zipextractor.cpp:81
↓ 1 callersMethodf
avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp:163
↓ 1 callersMethodfileExtensions
avogadro/qtplugins/openbabel/obfileformat.h:50
↓ 1 callersMethodfileExtensions
tests/io/fileformatmanagertest.cpp:198
↓ 1 callersMethodfilename
avogadro/io/hdf5dataformat.cpp:183
↓ 1 callersMethodfillStripe
avogadro/core/cube.cpp:430
↓ 1 callersMethodfillTable
avogadro/qtplugins/surfaces/orbitalwidget.cpp:108
↓ 1 callersMethodfillUnitCell
avogadro/qtplugins/spacegroup/spacegroup.cpp:522
↓ 1 callersFunctionfill_empty_translations
Fill empty msgstr with msgid values.
scripts/copy-default.py:20
↓ 1 callersFunctionfilter_sarif
(args)
scripts/github-actions/filter_sarif.py:66
↓ 1 callersMethodfindQueueIndices
avogadro/molequeue/molequeuequeuelistmodel.cpp:79
↓ 1 callersMethodforceVector
avogadro/core/atom.h:407
↓ 1 callersFunctionforeach
Let the tools perform any drawing they need to do.
avogadro/qtopengl/glwidget.cpp:95
↓ 1 callersFunctionforeach
avogadro/qtplugins/select/select.cpp:449
↓ 1 callersFunctionforeach
avogadro/qtplugins/gamessinput/gamesshighlighter.cpp:167
↓ 1 callersFunctionformatChargeType
avogadro/qtplugins/propertytables/propertymodel.cpp:183
↓ 1 callersFunctionformatPointGroup
avogadro/qtplugins/molecularproperties/molecularmodel.cpp:83
↓ 1 callersMethodfuzzParseFormat
tests/qtgui/fuzz-interfacescript-json.cpp:64
↓ 1 callersMethodfuzzParseJson
tests/qtgui/fuzz-interfacescript-json.cpp:48
↓ 1 callersMethodfuzzParsePattern
tests/qtgui/fuzz-interfacescript-json.cpp:69
↓ 1 callersMethodfuzzParseRules
tests/qtgui/fuzz-interfacescript-json.cpp:58
↓ 1 callersMethodfuzzReplaceKeywords
tests/qtgui/fuzz-interfacescript-json.cpp:75
↓ 1 callersMethodfuzzUpdateOptions
tests/qtgui/fuzz-jsonwidget.cpp:37
↓ 1 callersMethodgaussianPrimitiveExponentCoefficients
avogadro/qtplugins/qtaim/qtaimwavefunction.h:206
↓ 1 callersFunctiongenerateArrowGeometry
* Generate arrow geometry (cylinder shaft + cone head) for a single arrow. * Adapted from overlayaxes plugin. * * @param origin Start point of the
avogadro/rendering/arrowgeometry.cpp:103
↓ 1 callersMethodgenerateConformers
avogadro/qtplugins/openbabel/obprocess.cpp:438
↓ 1 callersMethodgenerateTextureHandle
avogadro/rendering/texture2d.cpp:278
↓ 1 callersMethodgetAngleValue
avogadro/qtplugins/propertytables/propertymodel.cpp:1287
↓ 1 callersMethodgetAtomBonds
avogadro/core/molecule.cpp:1782
↓ 1 callersMethodgetAtomOrders
avogadro/core/molecule.cpp:1792
↓ 1 callersMethodgetAtomsAtLayer
avogadro/core/molecule.cpp:1812
↓ 1 callersMethodgetGradCube
avogadro/core/cube.cpp:260
↓ 1 callersFunctiongetInteractionType
avogadro/qtplugins/noncovalent/noncovalent.cpp:94
↓ 1 callersFunctiongetOBB
Calculate the oriented bounding box to get the most significant axis base and the centroid
avogadro/qtplugins/resetview/resetview.cpp:270
↓ 1 callersMethodgetPosCube
avogadro/core/cube.cpp:299
↓ 1 callersMethodgetSave
get the saved data */
avogadro/core/layermanager.h:45
↓ 1 callersFunctiongetSingleTransform
avogadro/core/spacegroups.cpp:225
↓ 1 callersMethodgetThresholds
avogadro/qtplugins/symmetry/symmetrywidget.cpp:377
↓ 1 callersMethodgetTorsionValue
avogadro/qtplugins/propertytables/propertymodel.cpp:1310
↓ 1 callersMethodgetValsCube
avogadro/core/cube.cpp:276
↓ 1 callersMethodgradientCalls
tests/calc/energycalculatortest.cpp:121
↓ 1 callersMethodgradientOfElectronDensityLaplacian
avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp:706
↓ 1 callersMethodhasCustomElements
avogadro/core/molecule.cpp:1629
↓ 1 callersFunctionhasDefaultPixiManifest
Check whether the plugin directory has a usable pixi-managed python
avogadro/qtgui/pythonscript.cpp:22
↓ 1 callersFunctionhasErrors
* @return True if an error is set. */
avogadro/molequeue/inputgenerator.h:584
↓ 1 callersFunctionhasErrors
* @return True if an error is set. */
avogadro/qtgui/interfacescript.h:613
↓ 1 callersMethodhasInvalidMarks
avogadro/qtplugins/coordinateeditor/coordinatetextedit.h:28
↓ 1 callersFunctionhasMinimumRemainingBytes
avogadro/quantumio/gaussiancube.cpp:25
↓ 1 callersFunctionhasNonExecutablePixiPython
avogadro/qtgui/packagemanager.cpp:250
↓ 1 callersMethodhasSetupWidget
avogadro/qtplugins/label/label.h:33
↓ 1 callersFunctionheap_alloc
avogadro/qtplugins/qtaim/qtaimcubature.cpp:861
↓ 1 callersMethodhessianOfElectronDensityLaplacian
avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp:959
↓ 1 callersFunctionhydrogenBondDistance
avogadro/qtgui/hydrogentools.cpp:65
↓ 1 callersFunctioninitializeFramebuffer
avogadro/rendering/solidpipeline.cpp:65
↓ 1 callersFunctioninitializeFramebuffers
avogadro/rendering/volumegeometry.cpp:117
↓ 1 callersMethodinitializeVelocities
Initialize velocities to Maxwell-Boltzmann distribution at target temperature velocities: 3N vector to be filled [vx0, vy0, vz0, vx1, vy1, vz1, ...] m
avogadro/qtplugins/autoopt/csvrthermostat.h:272
↓ 1 callersMethodinitializeWithMoleculeProperties
avogadro/qtplugins/qtaim/qtaimwavefunction.cpp:346
↓ 1 callersMethodinitializeWithWFNFile
avogadro/qtplugins/qtaim/qtaimwavefunction.cpp:29
↓ 1 callersFunctioninterpolateData
* Interpolate data points at targetX (e.g., computed spectra) * from sourceX and sourceY. * * This function will linearly interpolate data points f
avogadro/qtplugins/spectra/spectradialog.cpp:114
↓ 1 callersFunctioninterpretCustomElementName
avogadro/core/elements.cpp:55
↓ 1 callersFunctioninterpretCustomElementSymbol
avogadro/core/elements.cpp:74
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