Method export_graphviz

_program.py:338–396

Returns a string, Graphviz script for visualizing the program. Parameters ---------- fade_nodes : list, optional A list of node indices to fade out for showing which were removed during evolution. Returns ------- output : stri

(self, fade_nodes=None)

        return output

    def export_graphviz(self, fade_nodes=None):
        """Returns a string, Graphviz script for visualizing the program.

        Parameters
        ----------
        fade_nodes : list, optional
            A list of node indices to fade out for showing which were removed
            during evolution.

        Returns
        -------
        output : string
            The Graphviz script to plot the tree representation of the program.

        """
        terminals = []
        if fade_nodes is None:
            fade_nodes = []
        output = 'digraph program {\nnode [style=filled]\n'
        for i, node in enumerate(self.program):
            fill = '#cecece'
            if isinstance(node, _Function):
                if i not in fade_nodes:
                    fill = '#136ed4'
                terminals.append([node.arity, i])
                output += ('%d [label="%s", fillcolor="%s"] ;\n'
                           % (i, node.name, fill))
            else:
                if i not in fade_nodes:
                    fill = '#60a6f6'
                if isinstance(node, int):
                    if self.feature_names is None:
                        feature_name = 'X%s' % node
                    else:
                        feature_name = self.feature_names[node]
                    output += ('%d [label="%s", fillcolor="%s"] ;\n'
                               % (i, feature_name, fill))
                else:
                    output += ('%d [label="%.3f", fillcolor="%s"] ;\n'
                               % (i, node, fill))
                if i == 0:
                    # A degenerative program of only one node
                    return output + '}'
                terminals[-1][0] -= 1
                terminals[-1].append(i)
                while terminals[-1][0] == 0:
                    output += '%d -> %d ;\n' % (terminals[-1][1],
                                                terminals[-1][-1])
                    terminals[-1].pop()
                    if len(terminals[-1]) == 2:
                        parent = terminals[-1][-1]
                        terminals.pop()
                        if not terminals:
                            return output + '}'
                        terminals[-1].append(parent)
                        terminals[-1][0] -= 1

        # We should never get here