Function main

Modules/ModelFit/cmdapps/PixelDump.cpp:377–447

}

int main(int argc, char* argv[])
{
  mitkCommandLineParser parser;
  setupParser(parser);
  const std::map<std::string, us::Any>& parsedArgs = parser.parseArguments(argc, argv);

  mitk::PreferenceListReaderOptionsFunctor readerFilterFunctor = mitk::PreferenceListReaderOptionsFunctor({ "MITK DICOM Reader v2 (autoselect)" }, { "" });

  if (!configureApplicationSettings(parsedArgs))
  {
    return EXIT_FAILURE;
  };

  // Show a help message
  if (parsedArgs.count("help") || parsedArgs.count("h"))
  {
    std::cout << parser.helpText();
    return EXIT_SUCCESS;
  }

  if (!captions.empty() && inFilenames.size() != captions.size())
  {
    std::cerr << "Cannot dump images. Number of given captions does not equal number of given images.";
    return EXIT_FAILURE;
  };

  //! [do processing]
  try
  {
    std::cout << "Load images:" << std::endl;
    for (auto path : inFilenames)
    {
      std::cout << "Input: " << path << std::endl;
      auto image = mitk::IOUtil::Load<mitk::Image>(path, &readerFilterFunctor);
      images.push_back(image);

    }

    if (!maskFileName.empty())
    {
      mask = mitk::IOUtil::Load<mitk::Image>(maskFileName, &readerFilterFunctor);
      std::cout << "Mask:  " << maskFileName << std::endl;
    }
    else
    {
      std::cout << "Mask:  none" << std::endl;
    }

    doDumping();
    storeCSV();

    std::cout << "Processing finished." << std::endl;

    return EXIT_SUCCESS;
  }
  catch (const itk::ExceptionObject& e)
  {
    MITK_ERROR << e.what();