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hub / github.com/InternScience/InternAgent / main

Function main

tasks/AutoMolecule3D/code/experiment.py:884–993  ·  view source on GitHub ↗
(args)

Source from the content-addressed store, hash-verified

882 return args
883
884def main(args):
885 pl.seed_everything(args.seed, workers=True)
886
887 # initialize data module
888 data = DataModule(args)
889 data.prepare_dataset()
890
891 default = ",".join(str(i) for i in range(torch.cuda.device_count()))
892 cuda_visible_devices = os.getenv("CUDA_VISIBLE_DEVICES", default=default).split(",")
893 dir_name = f"output_ngpus_{len(cuda_visible_devices)}_bs_{args.batch_size}_lr_{args.lr}_seed_{args.seed}" + \
894 f"_reload_{args.reload}_lmax_{args.lmax}_vnorm_{args.vecnorm_type}" + \
895 f"_vertex_{args.vertex_type}_L{args.num_layers}_D{args.embedding_dimension}_H{args.num_heads}" + \
896 f"_cutoff_{args.cutoff}_E{args.energy_weight}_F{args.force_weight}_loss_{args.loss_type}"
897
898 if args.load_model is None:
899 args.log_dir = os.path.join(args.out_dir, args.log_dir , dir_name)
900 if os.path.exists(args.log_dir):
901 if os.path.exists(os.path.join(args.log_dir, "last.ckpt")):
902 args.load_model = os.path.join(args.log_dir, "last.ckpt")
903 csv_path = os.path.join(args.log_dir, "metrics.csv")
904 while os.path.exists(csv_path):
905 csv_path = csv_path + '.bak'
906 if os.path.exists(os.path.join(args.log_dir, "metrics.csv")):
907 os.rename(os.path.join(args.log_dir, "metrics.csv"), csv_path)
908
909 prior = None
910 if args.prior_model:
911 assert hasattr(priors, args.prior_model), (
912 f"Unknown prior model {args['prior_model']}. "
913 f"Available models are {', '.join(priors.__all__)}"
914 )
915 # initialize the prior model
916 prior = getattr(priors, args.prior_model)(dataset=data.dataset)
917 args.prior_args = prior.get_init_args()
918
919 # initialize lightning module
920 model = LNNP(args, prior_model=prior, mean=data.mean, std=data.std)
921
922 dir_path = os.path.join(args.out_dir, "ckpt")
923
924 if args.task == "train":
925
926 checkpoint_callback = ModelCheckpoint(
927 dirpath=dir_path,
928 monitor="val_loss",
929 save_top_k=1,
930 save_last=True,
931 every_n_epochs=args.save_interval,
932 filename="best",
933 )
934
935 early_stopping = EarlyStopping("val_loss", patience=args.early_stopping_patience)
936
937 tb_logger = TensorBoardLogger(os.getenv("TENSORBOARD_LOG_PATH", "/tensorboard_logs/"), name="", version="", default_hp_metric=False)
938 csv_logger = CSVLogger(args.log_dir, name="", version="")
939 ddp_plugin = DDPStrategy(find_unused_parameters=False)
940
941 trainer = pl.Trainer(

Callers 1

experiment.pyFile · 0.70

Calls 12

prepare_datasetMethod · 0.95
DataModuleClass · 0.90
calculate_maeFunction · 0.90
LNNPClass · 0.85
formatMethod · 0.80
getenvMethod · 0.45
renameMethod · 0.45
get_init_argsMethod · 0.45
fitMethod · 0.45
testMethod · 0.45
saveMethod · 0.45
dumpMethod · 0.45

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