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Functions951 in github.com/HKUDS/AI-Researcher

↓ 1 callersMethodretrieve_on_page
Ask a question on the current page and return the answer.
research_agent/inno/environment/markdown_browser/requests_markdown_browser.py:252
↓ 1 callersFunctionrun_ablation_experiment
Run a single ablation experiment
examples/con_flowmatching/project/experiments/run_ablation_v2.py:24
↓ 1 callersFunctionrun_ablation_experiment
(config, ablation_type)
examples/hgcl/project/run_ablation.py:19
↓ 1 callersFunctionrun_ablation_studies
()
examples/rotation_vq/project/run_ablation_studies.py:9
↓ 1 callersFunctionrun_ai_researcher
(question: str, reference: str, example_module: str)
web_ai_researcher.py:515
↓ 1 callersFunctionrun_all_ablations
()
examples/hgcl/project/run_ablation.py:93
↓ 1 callersFunctionrun_benchmark_experiment
(config_variant)
examples/fsq/project/run_benchmark.py:17
↓ 1 callersFunctionrun_comparative_study
()
examples/rotation_vq/project/run_comparative_study.py:9
↓ 1 callersFunctionrun_enhanced_experiments
Run comprehensive enhanced experiments.
examples/gnn_nodeformer/project/experiments/run_enhanced_experiments.py:184
↓ 1 callersFunctionrun_experiment
Run a single experiment with given configuration.
examples/gnn_nodeformer/project/experiments/run_ablation_study.py:23
↓ 1 callersFunctionrun_experiment
Run a single experiment with given configuration
examples/con_flowmatching/project/experiments/ablation_study.py:22
↓ 1 callersFunctionrun_experiment
Run a single experiment with given configuration
examples/gnn_difformer/project/run_ablation_study_gpu2.py:24
↓ 1 callersFunctionrun_experiment
Run a single experiment with given configuration
examples/gnn_difformer/project/run_ablation_study.py:24
↓ 1 callersFunctionrun_experiment
Run a single experiment with given configuration
examples/gnn_difformer/project/run_mini_ablation.py:24
↓ 1 callersFunctionrun_experiment_dataset
Run experiment on a specific dataset.
examples/gnn_nodeformer/project/experiments/run_comparative_study.py:23
↓ 1 callersFunctionrun_experiments
()
examples/hgcl/project/run_final_experiments.py:20
↓ 1 callersFunctionrun_final_experiment
()
examples/rotation_vq/project/run_final_experiment.py:17
↓ 1 callersFunctionrun_hyperparam_study
Run hyperparameter study
examples/gnn_difformer/project/run_comprehensive_study_v2.py:80
↓ 1 callersFunctionrun_hyperparam_study
Run hyperparameter study
examples/gnn_difformer/project/run_comprehensive_study.py:73
↓ 1 callersFunctionrun_inference
(item, save_dir, model, base_url)
benchmark/process/dataset_candidate/reasoning/math_reasoning/run_infer.py:23
↓ 1 callersFunctionrun_sensitivity_analysis
()
examples/hgcl/project/run_experiments.py:151
↓ 1 callersFunctionrun_visualization_experiments
()
examples/rotation_vq/project/run_visualization_experiments.py:80
↓ 1 callersMethodsample
Sample a batch of training instances
examples/hgcl/project/data_processing/dataset.py:70
↓ 1 callersMethodsave_cache
(self, tool: Callable, tool_args: Dict, tool_result: Union[str, Dict])
research_agent/inno/workflow/flowcache.py:83
↓ 1 callersMethodsave_gradient_flow
(self, epoch)
examples/rotation_vq/project/run_visualization_experiments.py:37
↓ 1 callersMethodsave_intermediate_result
(self, file_name: str, keyword: str, papers: List[Dict])
benchmark_collection/0_crawl_paper.py:176
↓ 1 callersMethodsave_progress
(self)
benchmark_collection/0_crawl_paper.py:160
↓ 1 callersFunctionsave_yaml
(path: Path, data, sort_keys=True)
benchmark/process/dataset_candidate/reasoning/math_reasoning/run_infer.py:19
↓ 1 callersFunctionsearch_arxiv
(keyword: str, venue_api: VenueAPI, exact_match: bool = True, max_results: int = 100)
benchmark_collection/0_crawl_paper.py:189
↓ 1 callersFunctionsearch_arxiv
search arxiv papers Args: query (str): search keyword max_results (int): max return results Returns:
research_agent/inno/tools/arxiv_source.py:9
↓ 1 callersMethodset_temperature
Set temperature value for annealing. Args: temp (float): New temperature value
examples/fsq/project/model/quantization.py:47
↓ 1 callersMethodsetup_directories
Set up necessary directories for the composer
paper_agent/section_composer.py:37
↓ 1 callersFunctionsetup_experiment_logging
Setup logging for comprehensive experiments
examples/gnn_difformer/project/run_comprehensive_study_v2.py:10
↓ 1 callersFunctionsetup_experiment_logging
Setup logging for comprehensive experiments
examples/gnn_difformer/project/run_comprehensive_study.py:10
↓ 1 callersFunctionsetup_logging
()
web_ai_researcher.py:38
↓ 1 callersFunctionsetup_logging
Setup logging directory and return log file path
benchmark_collection/1_create_inno_graph.py:36
↓ 1 callersFunctionsetup_logging
(log_dir)
examples/gnn_difformer/project/run_hyperparameter_search.py:11
↓ 1 callersFunctionsetup_logging
(experiment_name)
examples/gnn_difformer/project/run_ablation_study_gpu2.py:10
↓ 1 callersFunctionsetup_logging
(experiment_name)
examples/gnn_difformer/project/run_ablation_study.py:10
↓ 1 callersFunctionsetup_logging
(experiment_name)
examples/gnn_difformer/project/run_mini_ablation.py:10
↓ 1 callersFunctionsetup_logging
()
examples/hgcl/project/run_ablation.py:9
↓ 1 callersFunctionsetup_logging
()
examples/hgcl/project/run_final_experiments.py:10
↓ 1 callersFunctionsetup_logging
()
examples/hgcl/project/run_experiments.py:11
↓ 1 callersFunctionsetup_path
()
web_ai_researcher.py:25
↓ 1 callersFunctionsetup_visualization
Setup logging directory for visualization results
examples/gnn_difformer/project/run_visualization_study.py:14
↓ 1 callersFunctionstage_files
Stage the specified file changes Args: file_paths (list): The file paths to stage, if None, add all changes to the staging area
research_agent/inno/tools/github_ops.py:33
↓ 1 callersFunctionsubmit_pull_request
Submit a Pull Request Args: title: PR title body: PR description target_branch: target branch
research_agent/inno/tools/github_ops.py:87
↓ 1 callersFunctionsupervised_loss
Compute supervised classification loss. Args: pred (torch.Tensor): Model predictions labels (torch.Tensor): Ground truth labe
examples/gnn_nodeformer/project/training/loss.py:7
↓ 1 callersFunctionterminal_page_down
Scroll the viewport DOWN one page-length in the current terminal. Use this function when the terminal is too long and you want to scroll down to
research_agent/inno/tools/terminal_tools.py:77
↓ 1 callersFunctionterminal_page_to
Move the viewport to the specified page index. The index starts from 1. Use this function when you want to move the viewport to a specific pa
research_agent/inno/tools/terminal_tools.py:89
↓ 1 callersFunctionterminal_page_up
Scroll the viewport UP one page-length in the current terminal. Use this function when the terminal is too long and you want to scroll up to see
research_agent/inno/tools/terminal_tools.py:64
↓ 1 callersFunctionto_dataframe_row
Helper function to convert Embedded Snippet object to a dataframe row in dictionary format. Args: embedded_snippets: List of Sni
research_agent/inno/memory/code_tree/code_parser.py:100
↓ 1 callersMethodto_dict
(self)
research_agent/inno/workflow/flowgraph.py:505
↓ 1 callersFunctiontrain_and_evaluate
(config, experiment_name)
examples/dccf/project/run_training_testing_refined.py:35
↓ 1 callersFunctiontrain_and_evaluate
(config, experiment_name)
examples/dccf/project/run_model_revision.py:54
↓ 1 callersFunctiontrain_and_evaluate
Train and evaluate a model with given configuration
examples/con_flowmatching/project/run_training_testing_v2.py:24
↓ 1 callersFunctiontrain_and_evaluate
Train and evaluate model with detailed tracking
examples/gnn_difformer/project/run_comprehensive_study_v2.py:23
↓ 1 callersFunctiontrain_and_evaluate
Train and evaluate model with detailed tracking
examples/gnn_difformer/project/run_comprehensive_study.py:23
↓ 1 callersFunctiontrain_model_with_config
Train a model with given hyperparameter configuration
examples/gnn_difformer/project/run_hyperparameter_search.py:23
↓ 1 callersFunctiontrans_fig
(instance_id)
examples/trans_fig.py:8
↓ 1 callersFunctiontransfer_fschema_to_dict
Transfer the fschema to a dictionary. Returns: A dictionary to input to workflow graph.
research_agent/inno/workflow/utils.py:6
↓ 1 callersFunctiontruncate_by_tokens
(env: DockerEnv, text, max_tokens = 4096, model="gpt-4o-2024-08-06")
research_agent/inno/tools/web_tools.py:329
↓ 1 callersFunctiontruncate_by_tokens
(env: DockerEnv, text, max_tokens = 4096, model="gpt-4o-2024-08-06")
research_agent/inno/tools/inno_tools/web_tools.py:325
↓ 1 callersFunctiontruncate_message
按比例截断消息
research_agent/inno/core.py:82
↓ 1 callersFunctiontryToClickChallenge
(this_page)
research_agent/inno/environment/browser_env.py:283
↓ 1 callersMethodtry_completion_with_truncation
(self, agent, history, context_variables, model_override, stream, debug)
research_agent/inno/core.py:437
↓ 1 callersMethodupdate_codebook
Update codebook using Exponential Moving Average. Args: z (torch.Tensor): Original input tensor assignments (torch.Te
examples/fsq/project/model/quantization.py:83
↓ 1 callersMethodupdate_codebook_ema
Update codebook using Exponential Moving Average (EMA)
examples/rotation_vq/project/model/vqvae.py:115
↓ 1 callersFunctionvalidate_input
验证用户输入是否有效 Args: question: 用户问题 Returns: bool: 输入是否有效
web_ai_researcher.py:500
↓ 1 callersFunctionvisit_url
Navigate directly to a provided URL using the browser's address bar. Prefer this tool over other navigation techniques in cases where the user pr
research_agent/inno/tools/web_tools.py:267
↓ 1 callersMethodvisualize
(self)
research_agent/inno/workflow/flowgraph.py:213
↓ 1 callersFunctionvisualize_codebook_evolution
(model, epoch, save_dir)
examples/rotation_vq/project/run_visualization_experiments.py:60
↓ 1 callersFunctionvisualize_representations
Visualize representations using t-SNE and PCA
examples/gnn_difformer/project/run_visualization_study.py:41
↓ 1 callersFunctionwait_for_container_ready
using subprocess to check if the container is running
research_agent/inno/environment/docker_container.py:73
↓ 1 callersMethodwait_for_container_ready
using subprocess to check if the container is running
research_agent/inno/environment/docker_env.py:102
↓ 1 callersFunctionwrap_google_scholar_search
(web_obs: WebObservation, action_description: str = "")
research_agent/inno/tools/inno_tools/web_tools.py:567
↓ 1 callersMethodwrap_query_results
(self, query_results: List[Dict])
research_agent/inno/memory/code_memory.py:60
↓ 1 callersMethodwrap_reranked_results
(self, reranked_paths: List[str])
research_agent/inno/memory/code_memory.py:67
↓ 1 callersFunctionwrite_file
Write content to a file. Use this function when there is a need to write content to an existing file. Args: path: The path to the fil
research_agent/inno/tools/terminal_tools.py:193
↓ 1 callersFunctionwriting
(research_field: str, instance_id: str)
paper_agent/writing.py:12
Method__call__
(self, retry_state: 'RetryCallState')
research_agent/inno/environment/tenacity_stop.py:10
Method__call__
(self, messages: List[Dict], context_variables: Dict, iter_times: int = None, *args, **kwargs)
research_agent/inno/workflow/flowcache.py:15
Method__call__
(self, tool_args: Dict, *args, **kwargs)
research_agent/inno/workflow/flowcache.py:75
Method__call__
(self, *args, **kwargs)
research_agent/inno/workflow/flowcache.py:117
Method__getitem__
(self, idx)
examples/dccf/project/data_processing/dataset.py:25
Method__getitem__
(self, idx)
examples/fsq/project/data_processing/dataset.py:37
Method__getitem__
(self, idx)
examples/rotation_vq/project/data_processing/cifar10.py:35
Method__init__
(self)
benchmark_collection/0_crawl_paper.py:29
Method__init__
(self, output_dir: Path)
benchmark_collection/0_crawl_paper.py:145
Method__init__
(self, api_key: str = None, model: str = 'gpt-4o-mini-2024-07-18')
benchmark_collection/utils/openai_utils.py:22
Method__init__
(self)
benchmark_collection/utils/pdf_utils.py:43
Method__init__
(self, **kwargs)
examples/dccf/project/run_training_testing_refined.py:21
Method__init__
(self)
examples/dccf/project/run_training_testing.py:13
Method__init__
(self, **kwargs)
examples/dccf/project/run_model_revision.py:25
Method__init__
(self, n_users, n_items, embed_dim, u_mul_s, v_mul_s, ut, vt, train_csr, adj_norm, n_layers,
examples/dccf/project/model/intentgcl.py:8
Method__init__
(self, embed_dim, n_intents, temp=0.2, use_multi_head=True, n_heads=4)
examples/dccf/project/model/intent_module.py:6
Method__init__
(self, coomat)
examples/dccf/project/data_processing/dataset.py:7
Method__init__
(self, in_features, out_features, num_heads=4, dropout=0.5)
examples/gnn_nodeformer/project/model/enhanced_model.py:63
Method__init__
(self, input_dim, hidden_dim, num_classes, num_layers=2, temperature=0.4, dropout=0.5, num_he
examples/gnn_nodeformer/project/model/enhanced_model.py:84
Method__init__
Initialize the operator. Args: temperature (float): Temperature parameter for Gumbel-Softmax hard (bool): Whether to
examples/gnn_nodeformer/project/model/kernelized_gumbel.py:11
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