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hub / github.com/GregoryFaust/samblaster / isFirstRead

Function isFirstRead

samblaster.cpp:480–480  ·  view source on GitHub ↗

Source from the content-addressed store, hash-verified

478inline bool isForwardStrand(splitLine_t * line) { return !isReverseStrand(line); }
479
480inline bool isFirstRead(splitLine_t * line) { return checkFlag(line, FIRST_SEG); }
481
482inline bool isSecondRead(splitLine_t * line) { return checkFlag(line, SECOND_SEG); }
483

Callers 3

writeSAMlineWithIdNumFunction · 0.85
markDupsDiscordantsFunction · 0.85
writeUnmappedClippedFunction · 0.85

Calls 1

checkFlagFunction · 0.85

Tested by

no test coverage detected