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github.com/DataBiosphere/toil @3.21.0

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repository ↗ · DeepWiki ↗ · release 3.21.0 ↗ · + Follow

3,053 symbols 12,466 edges 193 files 1,280 documented · 42%

What it actually does AI analysis from the code graph — generated when you open this

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Core symbols most depended-on inside this repo

join

called by 392

src/toil/lib/threading.py

add

called by 338

src/toil/wdl/wdl_parser.py

current

called by 197

src/toil/wdl/wdl_parser.py

write

called by 153

src/toil/fileStores/abstractFileStore.py

expect

called by 130

src/toil/wdl/wdl_parser.py

exists

called by 127

src/toil/jobStores/aws/jobStore.py

src/toil/realtimeLogger.py

Shape

Method 2,160

Function 565

Class 328

Languages

Python100%

Modules by API surface

src/toil/wdl/wdl_parser.py151 symbols

src/toil/job.py135 symbols

src/toil/test/jobStores/jobStoreTest.py101 symbols

src/toil/test/batchSystems/batchSystemTest.py91 symbols

src/toil/jobStores/aws/jobStore.py90 symbols

src/toil/cwl/cwltoil.py73 symbols

src/toil/jobStores/abstractJobStore.py71 symbols

src/toil/test/__init__.py69 symbols

src/toil/jobStores/azureJobStore.py67 symbols

src/toil/common.py62 symbols

src/toil/test/src/fileStoreTest.py60 symbols

src/toil/jobStores/fileJobStore.py58 symbols

For agents

$ claude mcp add toil \
  -- python -m otcore.mcp_server <graph>

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