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Functions10,710 in github.com/ComputationalRadiationPhysics/picongpu

↓ 1 callersMethod__init__
Parameters ---------- species : string short name of the particle species, e.g. 'e' for electrons (de
lib/python/picongpu/extra/plugins/data/phase_space.py:26
↓ 1 callersMethod__log_dirs
print human-readble list of paths to log
lib/python/picongpu/pypicongpu/runner.py:285
↓ 1 callersMethod__params_file
(self)
lib/python/picongpu/pypicongpu/runner.py:279
↓ 1 callersMethod__precheck_operation_conflicts
checks for conflicts between operations, ik ok passes silently intended to verify input (i.e. before any operation is performed)
lib/python/picongpu/pypicongpu/species/initmanager.py:115
↓ 1 callersMethod__precheck_species_conflicts
checks for conflicts between species, if ok passes silently intended to verify input (i.e. before any operation is performed)
lib/python/picongpu/pypicongpu/species/initmanager.py:91
↓ 1 callersMethod__render_custom_user_input_list
(self)
lib/python/picongpu/pypicongpu/simulation.py:78
↓ 1 callersMethod__render_templates
render the templates in the setup dir into a picongpu input Delegates work to Renderer(), see there for details.
lib/python/picongpu/pypicongpu/runner.py:300
↓ 1 callersMethod__reorder_species_dependencies
reorder self.all_species to respect dependencies of constants Constants may depend on other species to be present, i.e. ionizers may
lib/python/picongpu/pypicongpu/species/initmanager.py:251
↓ 1 callersMethod__run
execute PIConGPU this uses the N.cfg provided by the template, therefore will not work with any other configuration
lib/python/picongpu/pypicongpu/runner.py:325
↓ 1 callersMethod__yee_compute_cfl_or_delta_t
use delta_t or cfl to compute the other needs grid parameters for computation Only works if method is Yee. :throw A
lib/python/picongpu/picmi/simulation.py:115
↓ 1 callersMethod_betaFactor
(screenedCharge)
lib/python/picongpu/extra/utils/FLYonPICRateCalculationReference/BoundFreeCollisionalTransitions.py:19
↓ 1 callersMethod_calc_coulomb_log
(self, temp_e, temp_i)
share/picongpu/tests/CollisionsThermalisation/lib/python/picongpu/thermalization_verifier/ThermalizationVerifier.py:108
↓ 1 callersMethod_calculate_values
(self, ratio)
share/picongpu/tests/CollisionsBeamRelaxation/lib/python/picongpu/beam_relaxation_verifier/SmileiBeamRelaxation.py:42
↓ 1 callersMethod_check_and_fix_run_dirs
Check variable type for the run_directories and change to list of tuples if necessary. This can be overridden in derived clas
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:122
↓ 1 callersMethod_clean_ax
(self)
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:486
↓ 1 callersMethod_clean_ax
clear the ax and if available also clear possible colorbars that are still left from previous plots
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:98
↓ 1 callersMethod_create_plt_obj
Sets 'self.plt_obj' to an instance of a matplotlib.artist.Artist object (or derived classes) created by using 'self.ax' which
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:160
↓ 1 callersMethod_create_sim_dropdown
Provide the widget for selection of simulations. Can be overridden in derived classes if some of those widgets are not necess
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:227
↓ 1 callersMethod_create_widgets_for_vis_args
Provide additional UI widget elements that expose the parameters of the underlying plot_mpl visualizer instance that the user should
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:245
↓ 1 callersFunction_get_debug_data
(sim_path, collider_id, pair_id)
share/picongpu/tests/CollisionsThermalisation/lib/python/picongpu/thermalization_verifier/ThermalizationVerifier.py:21
↓ 1 callersFunction_get_debug_data
(sim_path, collider_id)
share/picongpu/tests/CollisionsBeamRelaxation/lib/python/picongpu/beam_relaxation_verifier/BeamRelaxationVerifier.py:26
↓ 1 callersMethod_get_for_iteration
Returns data for transition radiation visualization as specified with "type" for transition_radiation_visualizer.py Paramete
lib/python/picongpu/extra/plugins/data/transitionradiation.py:74
↓ 1 callersMethod_get_for_iteration
Get the data for a given iteration. Returns ------- The data for the requested parameters in a plugin depend
lib/python/picongpu/extra/plugins/data/base_reader.py:116
↓ 1 callersMethod_get_serialized
(self)
lib/python/picongpu/pypicongpu/solver.py:32
↓ 1 callersMethod_get_serialized
return all required content for rendering as a dict :return: content as dictionary
lib/python/picongpu/pypicongpu/rendering/renderedobject.py:185
↓ 1 callersMethod_init_colorbar_axes
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/phase_space_visualizer.py:97
↓ 1 callersMethod_init_colorbar_axes
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/energy_waterfall_visualizer.py:91
↓ 1 callersMethod_init_colorbar_axes
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/slice_emittance_waterfall_visualizer.py:92
↓ 1 callersMethod_init_colorbars
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/phase_space_visualizer.py:94
↓ 1 callersMethod_init_colorbars
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/energy_waterfall_visualizer.py:88
↓ 1 callersMethod_init_colorbars
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/slice_emittance_waterfall_visualizer.py:89
↓ 1 callersMethod_init_colors
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:119
↓ 1 callersMethod_init_data
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:113
↓ 1 callersMethod_init_fig_and_ax
Creates the figure and the ax as members.
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:204
↓ 1 callersMethod_init_members
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:71
↓ 1 callersMethod_init_plt_obj
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:116
↓ 1 callersMethod_init_reader
(self, run_directories)
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:110
↓ 1 callersMethod_legend
(self)
lib/python/picongpu/extra/plugins/plot_mpl/emittance_evolution_visualizer.py:112
↓ 1 callersMethod_legend
(self)
lib/python/picongpu/extra/plugins/plot_mpl/slice_emittance_visualizer.py:96
↓ 1 callersMethod_legend
(self)
lib/python/picongpu/extra/plugins/plot_mpl/energy_histogram_visualizer.py:102
↓ 1 callersMethod_load_debug_output
(self, path, collision_id)
share/picongpu/tests/CollisionsThermalisation/lib/python/picongpu/thermalization_verifier/SmileiThermalization.py:51
↓ 1 callersMethod_load_debug_output
(self, path)
share/picongpu/tests/CollisionsBeamRelaxation/lib/python/picongpu/beam_relaxation_verifier/SmileiBeamRelaxation.py:70
↓ 1 callersMethod_make_drop_val_compatible
Depending on the type of self.sim_drop we have to assign a single value or a tuple to the self.sim_drop.value. This function
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:413
↓ 1 callersMethod_multiplicity
(lowerStateLevelVector, upperStateLevelVector)
lib/python/picongpu/extra/utils/FLYonPICRateCalculationReference/BoundFreeCollisionalTransitions.py:27
↓ 1 callersMethod_remove_plt_obj
Removes the plt_obj at position idx from the current plot and sets it to None so that in a subsequent visualization call the
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:150
↓ 1 callersMethod_set_up_minimal_sim
(self, steps=1)
test/python/picongpu/compiling/simulation.py:42
↓ 1 callersMethod_set_up_sim
(self, **kw)
test/python/picongpu/compiling/simulation.py:31
↓ 1 callersMethod_show_run_dir_options_in_dropdown
Make the labels of the run_dir_options lookup table available for selection as options for the dropdown.
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:155
↓ 1 callersMethod_update_available_sim_times
Computes the intersection of simulation times that are present in all simulations currently selected. It automatically plots
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:323
↓ 1 callersMethod_update_plot_mpl_run_dir
Passes the selected simulations to the visualizer instance. Parameters ---------- selected_sims: list
lib/python/picongpu/extra/plugins/jupyter_widgets/base_widget.py:297
↓ 1 callersMethod_update_plt_obj
Take the 'self.data' member, interpret it and feed it into the 'self.plt_obj'.
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:169
↓ 1 callersMethod_wFactor
(U, screenedCharge)
lib/python/picongpu/extra/utils/FLYonPICRateCalculationReference/BoundFreeCollisionalTransitions.py:23
↓ 1 callersMethodabortAfter
thirdParty/alpaka/thirdParty/catch2/src/catch2/catch_config.cpp:203
↓ 1 callersMethodabortAfter
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:903
↓ 1 callersMethodabortAfter
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:10011
↓ 1 callersMethodaborting
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_run_context.cpp:489
↓ 1 callersMethodaborting
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:5882
↓ 1 callersMethodaborting
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:12970
↓ 1 callersMethodabsSq
thirdParty/alpaka/test/integ/mandelbrot/src/mandelbrot.cpp:30
↓ 1 callersFunctionacquireGeneratorTracker
thirdParty/alpaka/thirdParty/catch2/src/catch2/generators/catch_generators.cpp:30
↓ 1 callersFunctionacquireGeneratorTracker
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:2307
↓ 1 callersFunctionacquireGeneratorTracker
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:10982
↓ 1 callersMethodacquireGeneratorTracker
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_run_context.cpp:331
↓ 1 callersMethodacquireGeneratorTracker
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:5724
↓ 1 callersMethodacquireGeneratorTracker
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:12836
↓ 1 callersMethodadd
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_reusable_string_stream.cpp:24
↓ 1 callersFunctionaddDefaults
include/picongpu/plugins/openPMD/Json.cpp:298
↓ 1 callersMethodaddFilenameTag
thirdParty/alpaka/thirdParty/catch2/src/catch2/catch_test_case_info.cpp:213
↓ 1 callersMethodaddFilenameTag
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:1709
↓ 1 callersMethodaddInitialFilters
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_test_case_tracker.cpp:216
↓ 1 callersMethodaddInitialFilters
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:6816
↓ 1 callersMethodaddInitialFilters
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:14554
↓ 1 callersMethodaddListener
thirdParty/alpaka/thirdParty/catch2/src/catch2/reporters/catch_reporter_multi.cpp:24
↓ 1 callersMethodaddListener
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:17094
↓ 1 callersFunctionaddMetadataRegisteredAtCT
* Add the compiletime metadata at runtime. * * This function runs over the CT list `MetadataRegisteredAtCT` and adds all of them to the Meta
include/picongpu/simulation/control/SimulationStarter.hpp:48
↓ 1 callersMethodaddPassiveTask
include/pmacc/eventSystem/Manager.cpp:178
↓ 1 callersMethodaddQueues
* Add additional Queues to the queue. * @param count number of Queues to add. */
include/pmacc/eventSystem/queues/QueueController.hpp:81
↓ 1 callersMethodaddReporter
thirdParty/alpaka/thirdParty/catch2/src/catch2/reporters/catch_reporter_multi.cpp:30
↓ 1 callersMethodaddReporter
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:17098
↓ 1 callersFunctionaddSingleton
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_singletons.cpp:25
↓ 1 callersFunctionaddSingleton
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:6163
↓ 1 callersFunctionaddSingleton
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:13597
↓ 1 callersMethodaddTask
include/pmacc/eventSystem/Manager.cpp:172
↓ 1 callersFunctionadd_custom_jobs
Read custom jobs from yaml files and add it to the job_matrix_yaml. Args: job_matrix_yaml (List[Dict[str, Dict]]): The job matrix, contai
thirdParty/alpaka/script/job_generator/custom_job.py:45
↓ 1 callersFunctionadd_job_parameters
Add additional job parameters, which are depend of other parameters and has nothing to do with combinations. For example, decide if a job is a com
thirdParty/alpaka/script/job_generator/job_modifier.py:15
↓ 1 callersMethodadjust_plot
Executed after the plotting is done for adjusting legends etc...
lib/python/picongpu/extra/plugins/plot_mpl/base_visualizer.py:247
↓ 1 callersFunctionalignedAlloc
thirdParty/alpaka/include/alpaka/core/AlignedAlloc.hpp:14
↓ 1 callersFunctionalignedFree
thirdParty/alpaka/include/alpaka/core/AlignedAlloc.hpp:19
↓ 1 callersMethodall
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_list.cpp:83
↓ 1 callersFunctionallDivisorsLessOrEqual
thirdParty/alpaka/include/alpaka/workdiv/WorkDivHelpers.hpp:66
↓ 1 callersMethodallOk
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:15277
↓ 1 callersFunctionallocate_device_mem
thirdParty/cuda_memtest/ocl_memtest.cpp:160
↓ 1 callersFunctionallocate_small_mem
thirdParty/cuda_memtest/tests.cpp:1572
↓ 1 callersMethodallowThrows
thirdParty/alpaka/thirdParty/catch2/src/catch2/internal/catch_assertion_handler.cpp:35
↓ 1 callersMethodallowThrows
IConfig interface
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:885
↓ 1 callersMethodallowThrows
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:8238
↓ 1 callersFunctionanalyse
thirdParty/alpaka/thirdParty/catch2/src/catch2/benchmark/detail/catch_analyse.cpp:22
↓ 1 callersFunctionanalyse
thirdParty/mallocMC/thirdParty/catch2/include/catch2/catch.hpp:7237
↓ 1 callersFunctionanalyse_samples
thirdParty/alpaka/thirdParty/catch2/src/catch2/benchmark/detail/catch_stats.cpp:349
↓ 1 callersFunctionanalyse_samples
thirdParty/alpaka/thirdParty/catch2/extras/catch_amalgamated.cpp:498
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