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hub / github.com/CoBiG2/RAD_Tools / parse_sam

Function parse_sam

compare_maps.py:135–167  ·  view source on GitHub ↗

Parses a SAM file and retains each mapping location in the genome, along with the coverage. :param sam_file: string, path to SAM file :return map_locations: dictionary, with the genome contig/chromossome name plus position in the contig as value, and number of reads as value

(sam_file)

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Callers 1

mainFunction · 0.85

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