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github.com/COVIDAnalytics/DELPHI
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Functions
675 in github.com/COVIDAnalytics/DELPHI
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Functions
675
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Types & classes
63
Function
compute_mape_daily_delta_since_last_train
Computed the Mean Absolute Percentage Error between the daily differences of prediction between a previous train and a current train true/pre
Connecticut/DELPHI_utils_CT_static.py:2039
Function
compute_mape_daily_delta_since_last_train
Computed the Mean Absolute Percentage Error between the daily differences of prediction between a previous train and a current train true/pre
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1924
Function
compute_mape_daily_delta_since_last_train
Computed the Mean Absolute Percentage Error between the daily differences of prediction between a previous train and a current train true/pre
archive/V3 Model/DELPHI_utils_V3_static.py:1920
Function
compute_sign_mape
Compute the sign of the Mean Percentage Error, mainly to know if we're constantly over or undershooting :param y_true: list of true historica
DELPHI_utils_V4_static.py:1946
Function
compute_sign_mape
Compute the sign of the Mean Percentage Error, mainly to know if we're constantly over or undershooting :param y_true: list of true historica
Connecticut/DELPHI_utils_CT_static.py:2025
Function
compute_sign_mape
Compute the sign of the Mean Percentage Error, mainly to know if we're constantly over or undershooting :param y_true: list of true historica
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1910
Function
compute_sign_mape
Compute the sign of the Mean Percentage Error, mainly to know if we're constantly over or undershooting :param y_true: list of true historica
archive/V3 Model/DELPHI_utils_V3_static.py:1906
Function
convert_dates_us_policies
Converts dates from the dataframe with raw policies implemented in the US :param raw_date: a certain date string in a raw format :return:
DELPHI_utils_V4_dynamic.py:175
Function
convert_dates_us_policies
Converts dates from the dataframe with raw policies implemented in the US :param raw_date: a certain date string in a raw format :return:
Connecticut/DELPHI_utils_CT_dynamic.py:184
Function
convert_dates_us_policies
(x)
KIT/DELPHI_utils_KIT.py:576
Function
convert_dates_us_policies
(x)
CDC/DELPHI_utils_CDC.py:575
Function
convert_dates_us_policies
(x)
archive/V1 - No Jump/DELPHI_utils.py:646
Function
convert_dates_us_policies
(x)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:603
Function
convert_dates_us_policies
(x)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:793
Function
convert_dates_us_policies
(x)
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:603
Function
convert_dates_us_policies
(x)
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:601
Function
convert_dates_us_policies
Converts dates from the dataframe with raw policies implemented in the US :param raw_date: a certain date string in a raw format :return:
archive/V3 Model/DELPHI_utils_V3_dynamic.py:166
Function
convert_dates_us_policies
(x)
archive/Other Analyses/DELPHI_utils_secondwave.py:648
Function
convert_dates_us_policies
(x)
archive/Other Analyses/DELPHI_utils_new.py:598
Method
create_dataset_parameters
Creates the parameters dataset with the results from the optimization and the pre-computed MAPE :param mape: MAPE on the last 15 days
DELPHI_utils_V4_static.py:274
Method
create_dataset_parameters
(self, mape)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:164
Method
create_dataset_parameters
Creates the parameters dataset with the results from the optimization and the pre-computed MAPE :param mape: MAPE on the last 15 days
archive/V3 Model/DELPHI_utils_V3_static_serology.py:242
Method
create_dataset_parameters
(self, mape)
archive/Other Analyses/DELPHI_utils_secondwave.py:194
Method
create_datasets_predictions
Creates two dataframes with the predictions of the DELPHI model, the first one since the day of the prediction, the second since the
DELPHI_utils_V4_static.py:308
Method
create_datasets_predictions
Creates two dataframes with the predictions of the DELPHI model, the first one since the day of the prediction, the second since the
Connecticut/DELPHI_utils_CT_static.py:377
Method
create_datasets_predictions
(self)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:255
Method
create_datasets_predictions
Creates two dataframes with the predictions of the DELPHI model, the first one since the day of the prediction, the second since the
archive/V3 Model/DELPHI_utils_V3_static_serology.py:280
Method
create_datasets_predictions
(self)
archive/Other Analyses/DELPHI_utils_secondwave.py:300
Method
create_datasets_predictions_scenario
( self, policy: str = "Lockdown", time: int = 0, totalcases=None )
DELPHI_utils_V4_static.py:1062
Method
create_datasets_predictions_scenario
( self, policy: str = "Lockdown", time: int = 0, totalcases=None )
Connecticut/DELPHI_utils_CT_static.py:1131
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
CDC/DELPHI_utils_CDC.py:285
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:312
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:511
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:312
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:310
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/backtesting_archived/DELPHI_backtest_utils_ventilator.py:327
Method
create_datasets_predictions_scenario
( self, policy: str = "Lockdown", time: int = 0, totalcases=None )
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1034
Method
create_datasets_predictions_scenario
( self, policy="Lockdown", time=0, totalcases=None, )
archive/Other Analyses/DELPHI_utils_secondwave.py:355
Method
create_datasets_raw
Creates a dataset in the right format (with values for all 16 states of the DELPHI model) for the Optimal Vaccine Allocation team
Connecticut/DELPHI_utils_CT_static.py:455
Method
create_datasets_raw
(self)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:310
Method
create_datasets_raw
Creates a dataset in the right format (with values for all 16 states of the DELPHI model) for the Optimal Vaccine Allocation team
archive/V3 Model/DELPHI_utils_V3_static_serology.py:358
Method
create_datasets_raw
Creates a dataset in the right format (with values for all 16 states of the DELPHI model) for the Optimal Vaccine Allocation team
archive/V3 Model/DELPHI_utils_V3_static.py:353
Method
create_datasets_with_confidence_intervals
Generates the prediction datasets from the date with 100 cases and from the day of running, including columns containing Confidence I
Connecticut/DELPHI_utils_CT_static.py:544
Method
create_datasets_with_confidence_intervals
(self, fitcasesnd, fitcasesd, past_prediction_file = "I://covid19orc//danger_map//predicted//Global_V2_2020072
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:352
Method
create_datasets_with_confidence_intervals
Generates the prediction datasets from the date with 100 cases and from the day of running, including columns containing Confidence I
archive/V3 Model/DELPHI_utils_V3_static_serology.py:447
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
KIT/DELPHI_utils_KIT.py:154
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
CDC/DELPHI_utils_CDC.py:154
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/V1 - No Jump/DELPHI_utils.py:207
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:181
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:179
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:181
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:179
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Other Analyses/DELPHI_utils_secondwave.py:207
Method
create_df_backtest_performance_tuple
( self, fitcasesnd, fitcasesd, testcasesnd, testca
archive/Other Analyses/DELPHI_utils_new.py:176
Function
create_df_policy_change_tracking
()
KIT/DELPHI_utils_KIT.py:1034
Function
create_df_policy_change_tracking
()
CDC/DELPHI_utils_CDC.py:1033
Function
create_df_policy_change_tracking
()
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:1061
Function
create_df_policy_change_tracking
()
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:1282
Function
create_df_policy_change_tracking
()
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:1061
Function
create_df_policy_change_tracking
()
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:1059
Function
create_df_policy_change_tracking
()
archive/Other Analyses/DELPHI_utils_new.py:1056
Function
create_fitting_data_from_validcases
(validcases)
KIT/DELPHI_utils_KIT.py:531
Function
create_fitting_data_from_validcases
(validcases)
CDC/DELPHI_utils_CDC.py:530
Function
create_fitting_data_from_validcases
(validcases)
archive/V1 - No Jump/DELPHI_utils.py:601
Function
create_fitting_data_from_validcases
(validcases)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:558
Function
create_fitting_data_from_validcases
(validcases)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:748
Function
create_fitting_data_from_validcases
(validcases)
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:558
Function
create_fitting_data_from_validcases
(validcases)
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:556
Function
create_fitting_data_from_validcases
(validcases)
archive/backtesting_archived/DELPHI_backtest_utils_ventilator.py:637
Function
create_fitting_data_from_validcases
(validcases)
archive/Other Analyses/DELPHI_utils_secondwave.py:603
Function
create_fitting_data_from_validcases
(validcases)
archive/Other Analyses/DELPHI_utils_new.py:553
Method
generate_empty_metrics_dict
Generates the format of the dictionary that will compose the dataframe with all backtest metrics based on the get_mae and get_mse fla
Connecticut/DELPHI_utils_CT_static.py:1780
Method
generate_empty_metrics_dict
Generates the format of the dictionary that will compose the dataframe with all backtest metrics based on the get_mae and get_mse fla
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1682
Method
generate_empty_metrics_dict
Generates the format of the dictionary that will compose the dataframe with all backtest metrics based on the get_mae and get_mse fla
archive/V3 Model/DELPHI_utils_V3_static.py:1678
Method
get_aggregation_per_continent
Aggregates policy predictions at the continent level from the predictions dataframe :param df_policy_predictions: DELPHI policy predi
DELPHI_utils_V4_static.py:1556
Method
get_aggregation_per_continent
Aggregates policy predictions at the continent level from the predictions dataframe :param df_policy_predictions: DELPHI policy predi
Connecticut/DELPHI_utils_CT_static.py:1625
Method
get_aggregation_per_continent
(df: pd.DataFrame)
KIT/DELPHI_utils_KIT.py:435
Method
get_aggregation_per_continent
(df: pd.DataFrame)
CDC/DELPHI_utils_CDC.py:435
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/V1 - No Jump/DELPHI_utils.py:505
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:462
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:652
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:462
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:460
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/backtesting_archived/DELPHI_backtest_utils_ventilator.py:539
Method
get_aggregation_per_continent
Aggregates policy predictions at the continent level from the predictions dataframe :param df_policy_predictions: DELPHI policy predi
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1527
Method
get_aggregation_per_continent
Aggregates policy predictions at the continent level from the predictions dataframe :param df_policy_predictions: DELPHI policy predi
archive/V3 Model/DELPHI_utils_V3_static.py:1523
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Other Analyses/DELPHI_utils_secondwave.py:507
Method
get_aggregation_per_continent
(df: pd.DataFrame)
archive/Other Analyses/DELPHI_utils_new.py:457
Method
get_aggregation_per_country
Aggregates policy predictions at the country level from the predictions dataframe :param df_policy_predictions: DELPHI policy predict
DELPHI_utils_V4_static.py:1536
Method
get_aggregation_per_country
Aggregates policy predictions at the country level from the predictions dataframe :param df_policy_predictions: DELPHI policy predict
Connecticut/DELPHI_utils_CT_static.py:1605
Method
get_aggregation_per_country
(df: pd.DataFrame)
KIT/DELPHI_utils_KIT.py:424
Method
get_aggregation_per_country
(df: pd.DataFrame)
CDC/DELPHI_utils_CDC.py:424
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/V1 - No Jump/DELPHI_utils.py:494
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_trust.py:451
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/Test Models for V3/Normal Jump + Trust Solver/DELPHI_utils_V3_annealing.py:641
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/Test Models for V3/ArcTan Jump/DELPHI_utils_V4.py:451
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/Test Models for V3/Discrete Jump/DELPHI_utils_V2.py:449
Method
get_aggregation_per_country
(df: pd.DataFrame)
archive/backtesting_archived/DELPHI_backtest_utils_ventilator.py:528
Method
get_aggregation_per_country
Aggregates policy predictions at the country level from the predictions dataframe :param df_policy_predictions: DELPHI policy predict
archive/V3 Model/DELPHI_utils_V3_static_serology.py:1507
Method
get_aggregation_per_country
Aggregates policy predictions at the country level from the predictions dataframe :param df_policy_predictions: DELPHI policy predict
archive/V3 Model/DELPHI_utils_V3_static.py:1503
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