| 344 | cout << "..File "<<chrLenFileName<<" was read\n"; |
| 345 | } |
| 346 | unsigned long sum(const std::vector<int>& data) { |
| 347 | unsigned long sum = 0; |
| 348 | for (int i=0; i< (int) data.size(); i++) { |
| 349 | sum+=data[i]; |
| 350 | //cout << data[i] << "\n"; |
| 351 | } |
| 352 | return sum; |
| 353 | } |
| 354 | |
| 355 | long getLineNumber(std::string const& fileName, std::string const& refFileName, const std::string& pathToSamtools, const std::string& pathToSambamba, const std::string& SambambaThreads) { |
| 356 | string line ; |
no outgoing calls
no test coverage detected