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hub / github.com/BirolLab/abyss / assembleContig

Method assembleContig

Parallel/NetworkSequenceCollection.cpp:1173–1183  ·  view source on GitHub ↗

Assemble a contig. */

Source from the content-addressed store, hash-verified

1171
1172/** Assemble a contig. */
1173void NetworkSequenceCollection::assembleContig(
1174 FastaWriter* writer,
1175 BranchRecord& branch, unsigned id)
1176{
1177 size_t removed = AssemblyAlgorithms::assembleContig(
1178 this, writer, branch, id);
1179 if (removed > 0) {
1180 m_lowCoverageContigs++;
1181 m_lowCoverageKmer += removed;
1182 }
1183}
1184
1185namespace std {
1186 /** Add a pair of numbers. */

Callers

nothing calls this directly

Calls 1

assembleContigFunction · 0.85

Tested by

no test coverage detected