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hub / github.com/BirolLab/abyss / addReferenceSequence

Method addReferenceSequence

KAligner/Aligner.cpp:23–28  ·  view source on GitHub ↗

Source from the content-addressed store, hash-verified

21
22template <>
23void Aligner<SeqPosHashMultiMap>::addReferenceSequence(
24 const Kmer& kmer, Position pos)
25{
26 assert(opt::multimap == opt::MULTIMAP);
27 m_target.insert(make_pair(kmer, pos));
28}
29
30template <class SeqPosHashMap>
31void Aligner<SeqPosHashMap>::addReferenceSequence(

Callers 1

readContigsIntoDBFunction · 0.80

Calls 10

KmerClass · 0.85
PositionClass · 0.85
isDuplicateMethod · 0.80
setDuplicateMethod · 0.80
reverseComplementFunction · 0.50
insertMethod · 0.45
findMethod · 0.45
endMethod · 0.45
strMethod · 0.45
lengthMethod · 0.45

Tested by

no test coverage detected