MCPcopy Create free account
hub / github.com/BirolLab/abyss / construct

Method construct

Common/SuffixArray.h:42–47  ·  view source on GitHub ↗

Construct the suffix array. */

Source from the content-addressed store, hash-verified

40
41 /** Construct the suffix array. */
42 void construct()
43 {
44 if (m_dirty)
45 sort(m_data.begin(), m_data.end());
46 m_dirty = false;
47 }
48
49 /** Find all the elements whose suffix matches the prefix of the
50 * specified query sequence.

Callers 1

addOverlapsSAFunction · 0.80

Calls 2

beginMethod · 0.45
endMethod · 0.45

Tested by

no test coverage detected