* Return the position of the first base of the mate query on the * target extrapolated from the start of the alignment. */
| 305 | * target extrapolated from the start of the alignment. |
| 306 | */ |
| 307 | int mateTargetAtQueryStart() const |
| 308 | { |
| 309 | return targetAtQueryStart() + isize; |
| 310 | } |
| 311 | |
| 312 | friend std::ostream& operator <<(std::ostream& out, |
| 313 | const SAMRecord& o) |