Function translate_sequence_collection_orf_frame

dialign/translate.c:19–44

#include "io.h"

void translate_sequence_collection_orf_frame(struct seq_col *in_seq_col)
{
	int i;
	struct seq_col* tmp;
	tmp = set_longest_orf(in_seq_col);
/**************
	
	reading frames :

	0: 123 123 123 123 123 ...
	1: X 123 123 123 123 123 ...
	2: XX 123 123 123 123 123 ...
	3: ... 321 321 321 321 321 XX
	4:  ... 321 321 321 321 321 X
	5:    ... 321 321 321 321 321 

**************/
	for(i=0; i!= in_seq_col->length; ++i){
		in_seq_col->seqs[i].orf_frame = tmp->seqs[i].orf_frame;
		translate_sequence( &(in_seq_col->seqs[i]) );
		free(tmp->seqs[i].data);
		free(tmp->seqs[i].dna_num);
	}
	
	free(tmp);
}


void translate_sequence_collection_default(struct seq_col *in_seq_col)