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hub / github.com/BirolLab/abyss / getMeanCoverage

Function getMeanCoverage

PopBubbles/PopBubbles.cpp:496–500  ·  view source on GitHub ↗

Return the mean k-mer coverage of the specified vertex. */

Source from the content-addressed store, hash-verified

494
495/** Return the mean k-mer coverage of the specified vertex. */
496static float
497getMeanCoverage(const ContigProperties& vp)
498{
499 return (float)vp.coverage / getKmerLength(vp);
500}
501
502/** Remove contigs with insufficient coverage. */
503static void

Callers 1

filterGraphFunction · 0.85

Calls 1

getKmerLengthFunction · 0.85

Tested by

no test coverage detected