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Function sequence

Overlap/Overlap.cpp:145–149  ·  view source on GitHub ↗

Return the sequence of the specified contig. */

Source from the content-addressed store, hash-verified

143
144/** Return the sequence of the specified contig. */
145static string sequence(const ContigNode& id)
146{
147 const string& seq = g_contigs[id.id()];
148 return id.sense() ? reverseComplement(seq) : seq;
149}
150
151static unsigned findOverlap(const Graph& g,
152 const ContigNode& t_id,

Callers 2

findOverlapFunction · 0.70
createGapContigFunction · 0.70

Calls 3

idMethod · 0.80
senseMethod · 0.80
reverseComplementFunction · 0.50

Tested by

no test coverage detected