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Function reverseComplement

Assembly/SeqExt.h:16–19  ·  view source on GitHub ↗

Return the complement of the specified base. * The reverse of a single base is a no-op. * If the assembly is in colour space, this is a no-op. */

Source from the content-addressed store, hash-verified

14 * If the assembly is in colour space, this is a no-op.
15 */
16static inline uint8_t reverseComplement(uint8_t base)
17{
18 return opt::colourSpace ? base : ~base & 0x3;
19}
20
21/** The adjacent vertices of a Kmer. */
22class SeqExt

Callers 10

setDeletedKeyMethod · 0.70
setBaseExtensionMethod · 0.70
findMethod · 0.70
operator*Method · 0.70
getFunction · 0.70
loadSequencesFunction · 0.70
mergeReadsFunction · 0.50
alignFilesFunction · 0.50
addOverlapsSAFunction · 0.50
readContigsFunction · 0.50

Calls

no outgoing calls

Tested by

no test coverage detected