Method stringToBytes

src/rnabloom/util/SeqUtils.java:64–79

(String seq, int len)

    private static final float LOW_COMPLEXITY_THRESHOLD_LONG_SEQ = 0.89f;
    
    public static final byte[] stringToBytes(String seq, int len) {
        byte[] arr = new byte[len];
        
        byte b;
        for (int i=0; i<len; ++i) {
            b = (byte) seq.charAt(i);
            if (b == CHAR_U_INT) {
                arr[i] = CHAR_T_INT;
            }
            else {
                arr[i] = b;
            }
        }
        
        return arr;
    }
    
    public static final String bytesToString(byte[] bytes, int len) {
        StringBuilder sb = new StringBuilder(len);