(final ArrayList<Kmer> kmers)
| 217 | } |
| 218 | |
| 219 | public static float[] getMinMedMaxKmerCoverage(final ArrayList<Kmer> kmers) { |
| 220 | int len = kmers.size(); |
| 221 | float[] covs = new float[len]; |
| 222 | for (int i=0; i<len; ++i) { |
| 223 | covs[i] = kmers.get(i).count; |
| 224 | } |
| 225 | |
| 226 | return getMinMedMax(covs); |
| 227 | } |
| 228 | |
| 229 | public static float getMedianKmerCoverage(final Collection<Kmer> kmers) { |
| 230 | int numKmers = kmers.size(); |
no test coverage detected