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hub / github.com/BirolLab/RNA-Bloom / getPredecessors

Method getPredecessors

src/rnabloom/graph/Kmer.java:199–201  ·  view source on GitHub ↗
(int k, int numHash, BloomFilterDeBruijnGraph graph)

Source from the content-addressed store, hash-verified

197 }
198
199 public ArrayDeque<Kmer> getPredecessors(int k, int numHash, BloomFilterDeBruijnGraph graph) {
200 return getPredecessors(k, numHash, graph, 1);
201 }
202
203 public ArrayDeque<Kmer> getPredecessors(int k, int numHash, BloomFilterDeBruijnGraph graph, float minKmerCov) {
204 ArrayDeque<Kmer> result = new ArrayDeque<>(4);

Callers 14

getMaxCoveragePathMethod · 0.95
connectMethod · 0.95
naiveExtendLeftMethod · 0.95
extendLeftMethod · 0.95
greedyExtendLeftOnceMethod · 0.45
joinMethod · 0.45
findPathMethod · 0.45
getPredecessorsRankedMethod · 0.45
extendLeftSEMethod · 0.45

Calls 8

startMethod · 0.95
hasNextMethod · 0.95
nextMethod · 0.95
currentCharMethod · 0.95
shiftRightMethod · 0.80
getCountMethod · 0.65
addMethod · 0.65
lookupMethod · 0.65

Tested by

no test coverage detected