hub / github.com/BiAPoL/napari-clusters-plotter
github.com/BiAPoL/napari-clusters-plotter @v0.10.0
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README
napari-clusters-plotter
A napari-plugin for clustering objects according to their properties.
Documentation
The documentation for the napari-clusters-plotter is available under the above link.
License
Distributed under the terms of the BSD-3 license, "napari-clusters-plotter" is free and open source software
Acknowledgements
This project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence "Physics of Life" of TU Dresden. This project has been made possible in part by grant number 2021-240341 (Napari plugin accelerator grant) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation.
Issues
If you encounter any problems, please file an issue along with a detailed description.
Core symbols most depended-on inside this repo
_get_features
called by 12
src/napari_clusters_plotter/_algorithm_widget.py
_napari_to_mpl_cmap
called by 5
src/napari_clusters_plotter/_new_plotter_widget.py
_update_layer_colors
called by 4
src/napari_clusters_plotter/_new_plotter_widget.py
_on_show_plot_overlay
called by 3
src/napari_clusters_plotter/_new_plotter_widget.py
_set_layer_color
called by 3
src/napari_clusters_plotter/_new_plotter_widget.py
_update_features
called by 3
src/napari_clusters_plotter/_algorithm_widget.py
_on_finish_draw
called by 2
src/napari_clusters_plotter/_new_plotter_widget.py
_estimate_number_bins
called by 2
src/napari_clusters_plotter/_new_plotter_widget.py
Shape
Languages
Python100%
Modules by API surface
src/napari_clusters_plotter/_new_plotter_widget.py39 symbols
src/napari_clusters_plotter/_tests/test_plotter.py21 symbols
src/napari_clusters_plotter/_algorithm_widget.py20 symbols
src/napari_clusters_plotter/_algorithms.py14 symbols
src/napari_clusters_plotter/_tests/test_dimensionality_reduction.py10 symbols
src/napari_clusters_plotter/_dim_reduction_and_clustering.py6 symbols
src/napari_clusters_plotter/_sample_data.py4 symbols
src/napari_clusters_plotter/_utilities.py1 symbols
src/napari_clusters_plotter/_tests/test_sample_data.py1 symbols
src/napari_clusters_plotter/_tests/test_layers.py1 symbols
For agents
$ claude mcp add napari-clusters-plotter \
-- python -m otcore.mcp_server <graph>