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hub / github.com/AstroImageJ/astroimagej / makeStack

Method makeStack

ij/src/main/java/ij/plugin/AVI_Reader.java:414–442  ·  view source on GitHub ↗

Create an ImageStack from an avi file with given path. @param path Directoy+filename of the avi file @param firstFrame Number of first frame to read (first frame of the file is 1) @param lastFrame Number of last frame to read or 0 for reading all, -1 for all but last... @param isVirtual Whet

(String path, int firstFrame, int lastFrame,
			boolean isVirtual, boolean convertToGray, boolean flipVertical)

Source from the content-addressed store, hash-verified

412 * For virtual stacks, not that I/O errors may also occur later, when reading the frames.
413 */
414 public ImageStack makeStack (String path, int firstFrame, int lastFrame,
415 boolean isVirtual, boolean convertToGray, boolean flipVertical) {
416 this.firstFrame = firstFrame;
417 this.lastFrame = lastFrame;
418 this.isVirtual = isVirtual;
419 this.convertToGray = convertToGray;
420 this.flipVertical = flipVertical;
421 IJ.showProgress(.001);
422 try {
423 readAVI(path);
424 } catch (OutOfMemoryError e) {
425 stack.trim();
426 errorText = "Out of memory. " + stack.size() + " of " + dwTotalFrames + " frames will be opened.";
427 } catch (Exception e) {
428 errorText = exceptionMessage(e);
429 if (isVirtual || stack==null || stack.size()==0) //return null only if we have really nothing
430 return null;
431 } finally {
432 closeFile(raFile);
433 if (verbose)
434 IJ.log("File closed.");
435 IJ.showProgress(1.0);
436 }
437 if (isVirtual && frameInfos != null)
438 stack = this;
439 if (stack!=null && cm!=null)
440 stack.setColorModel(cm);
441 return stack;
442 }
443
444 /** Returns a description of the error reading the file with <code>makeStack</code> or null if no error */
445 public String getErrorText() {

Callers 2

runMethod · 0.95
openMethod · 0.95

Calls 8

showProgressMethod · 0.95
readAVIMethod · 0.95
exceptionMessageMethod · 0.95
closeFileMethod · 0.95
logMethod · 0.95
trimMethod · 0.45
sizeMethod · 0.45
setColorModelMethod · 0.45

Tested by

no test coverage detected