Implements the Image/Stacks/Images to Stack" command.
| 22 | |
| 23 | /** Implements the Image/Stacks/Images to Stack" command. */ |
| 24 | public class ImagesToStack implements PlugIn { |
| 25 | private static final int rgb = 33; |
| 26 | private static final int COPY_CENTER=0, COPY_TOP_LEFT=1, SCALE_SMALL=2, SCALE_LARGE=3; |
| 27 | private static final String[] methods = {"Copy (center)", "Copy (top-left)", "Scale (smallest)", "Scale (largest)"}; |
| 28 | private static int staticMethod = COPY_CENTER; |
| 29 | private static boolean staticBicubic; |
| 30 | private static boolean staticKeep; |
| 31 | private static boolean staticTitlesAsLabels = true; |
| 32 | private int method = COPY_CENTER; |
| 33 | private boolean bicubic; |
| 34 | private boolean keep; |
| 35 | private boolean titlesAsLabels = true; |
| 36 | private String filter; |
| 37 | private int width, height; |
| 38 | private int maxWidth, maxHeight; |
| 39 | private int minWidth, minHeight; |
| 40 | private int minSize, maxSize; |
| 41 | private boolean allInvertedLuts; |
| 42 | private Calibration cal2; |
| 43 | private int stackType; |
| 44 | private ImagePlus[] images; |
| 45 | private String name = "Stack"; |
| 46 | private Color fillColor; |
| 47 | |
| 48 | /** Converts the images in 'images' to a stack, using the |
| 49 | default settings ("copy center" and "titles as labels"). */ |
| 50 | public static ImagePlus run(ImagePlus[] images) { |
| 51 | ImagesToStack itos = new ImagesToStack(); |
| 52 | int count = itos.findMinMaxSize(images, images.length); |
| 53 | return itos.convert(images, count); |
| 54 | } |
| 55 | |
| 56 | public void run(String arg) { |
| 57 | convertImagesToStack(); |
| 58 | } |
| 59 | |
| 60 | public void convertImagesToStack() { |
| 61 | boolean scale = false; |
| 62 | int[] wList = WindowManager.getIDList(); |
| 63 | if (wList==null) { |
| 64 | IJ.error("No images are open."); |
| 65 | return; |
| 66 | } |
| 67 | |
| 68 | int count = 0; |
| 69 | int stackCount = 0; |
| 70 | images = new ImagePlus[wList.length]; |
| 71 | for (int i=0; i<wList.length; i++) { |
| 72 | ImagePlus imp = WindowManager.getImage(wList[i]); |
| 73 | if (imp.getStackSize()==1) |
| 74 | images[count++] = imp; |
| 75 | else |
| 76 | stackCount++; |
| 77 | } |
| 78 | if (count<2) { |
| 79 | String msg = ""; |
| 80 | if (stackCount>1) |
| 81 | msg = "\n \nUse the Image>Stacks>Tools>Concatenate\ncommand to combine stacks."; |
nothing calls this directly
no outgoing calls
no test coverage detected