This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands.
| 36 | |
| 37 | /** This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands. */ |
| 38 | public class BatchProcessor implements PlugIn, ActionListener, ItemListener, Runnable { |
| 39 | private static final String MACRO_FILE_NAME = "BatchMacro.ijm"; |
| 40 | private static final String[] formats = {"TIFF", "8-bit TIFF", "JPEG", "GIF", "PNG", "PGM", "BMP", "FITS", "Text Image", "ZIP", "Raw"}; |
| 41 | private static String format = Prefs.get("batch.format", formats[0]); |
| 42 | |
| 43 | private static final String[] code = { |
| 44 | "[Select from list]", |
| 45 | "Add Border", |
| 46 | "Convert to RGB", |
| 47 | "Crop", |
| 48 | "Gaussian Blur", |
| 49 | "Invert", |
| 50 | "Label", |
| 51 | "Timestamp", |
| 52 | "Max Dimension", |
| 53 | "Measure", |
| 54 | "Print Index and Title", |
| 55 | "Resize", |
| 56 | "Scale", |
| 57 | "Show File Info", |
| 58 | "Unsharp Mask", |
| 59 | }; |
| 60 | |
| 61 | private static final String help = "<html>" |
| 62 | +"<h1>Process>Batch>Virtual Stack</h1>" |
| 63 | +"<font size=+1>" |
| 64 | +"This command runs macro code on each image in a virtual stack.<br>" |
| 65 | +"The processed images are saved in the <i>Output</i> folder,<br>" |
| 66 | +"in the specified <i>Format</i>, allowing them to be opened as a<br>" |
| 67 | +"virtual stack. Make sure the <i>Output</i> folder is empty<br>" |
| 68 | +"before clicking on <i>Process</i>.<br>" |
| 69 | +"<br>" |
| 70 | +"In the macro code, the 'i' (slice index) and 'n' (stack size) variables<br>" |
| 71 | +"are predefined. Call <i>setOption('SaveBatchOutput',false)</i> to<br>" |
| 72 | +"prevent the image currently being processed from being saved,<br>" |
| 73 | +"effectively removing it from the output virtual stack.<br> <br>" |
| 74 | +"</font>"; |
| 75 | |
| 76 | private String macro = ""; |
| 77 | private int testImage; |
| 78 | private Button input, output, open, save, test; |
| 79 | private TextField inputDir, outputDir; |
| 80 | private GenericDialog gd; |
| 81 | private Thread thread; |
| 82 | private ImagePlus virtualStack; |
| 83 | private ImagePlus outputImage; |
| 84 | private boolean errorDisplayed; |
| 85 | private String filter; |
| 86 | private static boolean saveOutput = true; |
| 87 | |
| 88 | public void run(String arg) { |
| 89 | if (arg.equals("stack")) { |
| 90 | virtualStack = IJ.getImage(); |
| 91 | if (virtualStack.getStackSize()==1) { |
| 92 | error("This command requires a stack or virtual stack."); |
| 93 | return; |
| 94 | } |
| 95 | } |