Functions — github.com/8051Enthusiast/biodiff

hub / github.com/8051Enthusiast/biodiff / functions

Functions441 in github.com/8051Enthusiast/biodiff

This function is the one that processes actions sent by the event reader loop setup in `aligned_cross`, and also the ones sent by the alignment proces

src/control.rs:403

↓ 1 callersFunctionapply_rustbio

(siv: &mut Cursive, algo: &mut AlignAlgorithm, errors: &mut String)

src/dialog/algorithm_settings.rs:16

↓ 1 callersFunctionapply_wfa2

(_: &mut Cursive, algo: &mut AlignAlgorithm, errors: &mut String)

src/dialog/algorithm_settings.rs:33

↓ 1 callersMethodascii_start

physical column of the start of the ascii column, if it exists

src/style.rs:366

↓ 1 callersMethodauto_column

Sets the column count to the peak of the autocorrelation of the bytes in the current view and refreshes the view

src/view/aligned.rs:474

↓ 1 callersMethodauto_column

Sets the column count to the peak of the autocorrelation of the bytes in the current view and refreshes the view

src/view/unaligned.rs:310

↓ 1 callersMethodbars_start

physical column of the start of the bars column, if it exists

src/style.rs:382

↓ 1 callersMethodbars_width

width of one bars column

src/style.rs:374

↓ 1 callersMethodbytes_in_view

(&self)

src/view/aligned.rs:133

↓ 1 callersMethodbytes_in_view

(&self)

src/view/unaligned.rs:151

↓ 1 callersMethodcheck_start_align

( &self, files: [FileContent; 2], selection: [Option<Range<usize>>; 2], )

src/align.rs:134

↓ 1 callersFunctioncigar_op_slice

(cigar: &cigar_t)

src/align/wfa2.rs:91

↓ 1 callersFunctioncolor_from_mixed_bytes

Insertions/Deletions are typically green, mismatches red and same bytes white

src/style.rs:202

↓ 1 callersFunctioncombine_spans

merge two span options

hexagex/src/lib.rs:766

↓ 1 callersMethodconcat

concatenate two elements that have a combined length less than or equal to 8

hexagex/src/lib.rs:711

↓ 1 callersMethodcontinues_on_right

(self, rtl: bool)

src/selection.rs:20

↓ 1 callersFunctioncorrelation_thread

( vecs: [FileContent; 2], inbyte: Arc<AtomicU16>, outvecs: SyncSender<Vec<Complex64>>, fft: Ar

src/align.rs:659

↓ 1 callersMethodcurrent_cursor_addresses_clamped

(&self)

src/view/unaligned.rs:430

↓ 1 callersMethodcurrent_global

(&self)

src/preset.rs:42

↓ 1 callersMethodcurrent_semiglobal

(&self)

src/preset.rs:45

↓ 1 callersFunctioncursiv_align_relay

Forwards `AlignedMessage`s from the alignment thread into callbacks for the cursive instance

src/control.rs:314

↓ 1 callersFunctioncursiv_theme

Default Cursive theme except that the background color is black

src/control.rs:306

↓ 1 callersMethoddelete

deletes the preset at `cursor`, returning false if deleting would leave 0 items

src/preset.rs:78

↓ 1 callersFunctiondelete_preset

(siv: &mut Cursive, kind: AlgorithmKind, i: usize)

src/dialog/algorithm_presets.rs:18

↓ 1 callersMethodderef

(&self)

src/file.rs:44

↓ 1 callersFunctiondisp_binary

(h: Option<u8>)

src/style.rs:78

↓ 1 callersFunctiondisp_braille

(h: Option<u8>)

src/style.rs:99

↓ 1 callersFunctiondisp_decimal

(h: Option<u8>)

src/style.rs:92

↓ 1 callersFunctiondisp_hex

Contains two hex digits of a byte and a space behind it, or just three spaces for None

src/style.rs:71

↓ 1 callersFunctiondisp_mixed

(h: Option<u8>)

src/style.rs:112

↓ 1 callersFunctiondisp_octal

(h: Option<u8>)

src/style.rs:85

↓ 1 callersFunctiondisp_roman

(h: Option<u8>)

src/style.rs:141

↓ 1 callersFunctionentropy

returns the entropy of a blob of data

src/util.rs:116

↓ 1 callersMethodevent_proc

Call the relevant event processing functions for the crossterm backend

src/control.rs:130

↓ 1 callersMethodextract_high

extract the part of the element before the boundary

hexagex/src/lib.rs:643

↓ 1 callersMethodextract_low

extract the part of the element beyond the boundary

hexagex/src/lib.rs:618

↓ 1 callersMethodfiles

(&self)

src/control.rs:90

↓ 1 callersMethodfirst_bound

Returns the possible indexes where the first vector has data

src/datastruct.rs:156

↓ 1 callersFunctionget_settings

(args: &Args)

src/config.rs:288

↓ 1 callersFunctionget_underline_ranges

turns an underline string that looks somewhat like " ^----$ " into the ranges represented by it

hexagex/src/lib.rs:954

↓ 1 callersFunctionh

(s: &(impl AsRef<[u8]> + ?Sized))

hexagex/src/lib.rs:943

↓ 1 callersMethodhalf_width

width of one of the two hex screens

src/style.rs:396

↓ 1 callersMethodhighest_common_entropy

Calculates the index of a subsequence (with the current offset) where the product of entropy and length is the highest

src/datastruct.rs:165

↓ 1 callersMethodinitial

Appends initial alignment data to the DoubleVec, and sets the cursor such that it stays on the same address as given in addr.

src/view/aligned.rs:220

↓ 1 callersMethodinto_aligned

Turns a hexview into an aligned view using the given algorithm parameters

src/control.rs:97

↓ 1 callersMethodinto_unaligned

Turns a hexview into an unaligned view at the current cursor

src/control.rs:117

↓ 1 callersMethodis_active

(self)

src/selection.rs:16

↓ 1 callersMethodjump_end

Go to the last position of the file

src/view/aligned.rs:423

↓ 1 callersMethodjump_end

Go to the last position of the file

src/view/unaligned.rs:523

↓ 1 callersMethodjump_next_search_result

Jump to the next search result on either active cursor after the current index

src/view/unaligned.rs:478

↓ 1 callersMethodjump_prev_search_result

Jump to the previous search reult on either active cursor before the current index

src/view/aligned.rs:390

↓ 1 callersMethodjump_prev_search_result

Jump to the previous search reult on either active cursor before the current index

src/view/unaligned.rs:489

↓ 1 callersMethodjump_start

Go to the first position of the file

src/view/aligned.rs:419

↓ 1 callersMethodjump_start

Go to the first position of the file

src/view/unaligned.rs:518

↓ 1 callersFunctionlink_wfa

()

biodiff-wfa2-sys/build.rs:4

↓ 1 callersMethodload_memory_warn_status

(&mut self)

src/config.rs:173

↓ 1 callersFunctionmatches

(expr: &str, content: &'a [u8])

hexagex/src/lib.rs:946

↓ 1 callersMethodmirror

mirrors the values

src/align.rs:477

↓ 1 callersMethodmove_cursor_x_bounded

move cursor in x direction without going out of bounds

src/cursor.rs:112

↓ 1 callersMethodmove_cursor_y_bounded

move cursor in y direction without going out of bounds

src/cursor.rs:119

↓ 1 callersMethodmove_view_x_bounded

move the view in x direction without going out of bounds

src/cursor.rs:126

↓ 1 callersMethodmove_view_y_bounded

move the view in y direction without going out of bounds

src/cursor.rs:142

↓ 1 callersMethodnext_result

get the next result after addr Returns None if there is no result, and Some(Err) if the result is after wraparound

src/search.rs:131

↓ 1 callersMethodnth_column_pos

the position of the first character of the nth hex column

src/style.rs:404

↓ 1 callersFunctionon_search

Action to execute when submitting a search

src/dialog/search.rs:63

↓ 1 callersMethodops

(&self)

src/align/wfa2.rs:78

↓ 1 callersFunctionops_pattern_subrange

Removes leading/trailing deletions and clips from the alignment

src/align.rs:550

↓ 1 callersMethodprepend

Prepends alignment data to the underlying DoubleVec. Returns true if something in view changed.

src/view/aligned.rs:237

↓ 1 callersMethodprev_result

get the previous result before addr Returns None if there is no result, and Some(Err) if the result is after wraparound

src/search.rs:166

↓ 1 callersFunctionprint

(mut settings: Settings, x: FileContent, y: FileContent, color: bool)

src/print.rs:97

↓ 1 callersMethodprocess_cross

control loop for crossterm backend, switches the view between aligned and unaligned when requested and runs event loops

src/control.rs:163

↓ 1 callersMethodprocess_move

Process move events

src/view/aligned.rs:511

↓ 1 callersMethodprocess_move

Function that processes only the move events

src/view/unaligned.rs:269

↓ 1 callersMethodquery_type

(&self)

src/search.rs:60

↓ 1 callersFunctionrate_limit_channel

construct a rate limited channel of maximum buffer size `size`, refresh period `period` and a receiver where data is pushed to, that returns a functio

src/util.rs:89

↓ 1 callersMethodreload

(&mut self, cross: &mut Cross)

src/control.rs:144

↓ 1 callersMethodremove_column

Decreases the column count by one and refreshes the view

src/view/aligned.rs:468

↓ 1 callersMethodremove_column

Decreases the column count by one and refreshes the view

src/view/unaligned.rs:304

↓ 1 callersFunctionrun

This is the main loop, here we switch between our custom backend and the cursive backend when opening dialog boxes. This is done because initially, th

src/control.rs:34

↓ 1 callersFunctionrustbio_settings

(rustbio: RustBio)

src/dialog/algorithm_settings.rs:133

↓ 1 callersMethodsave_config

(&self)

src/config.rs:252

↓ 1 callersFunctionscorer

( algo: &AlignAlgorithm, mode: InternalMode, )

src/align/rustbio.rs:22

↓ 1 callersMethodscroll

(&mut self, _: isize)

src/backend.rs:305

↓ 1 callersFunctionsearch_result_receiver

creates an adapter to put the search results into

src/dialog/search.rs:155

↓ 1 callersFunctionsearch_result_status

create a new view showing the search progress

src/dialog/search.rs:140

↓ 1 callersMethodsecond_bound

Returns the possible indexes where the second vector has data

src/datastruct.rs:160

↓ 1 callersMethodsecond_cursor

returns the position of the second cursor on the hex view

src/doublehex.rs:194

↓ 1 callersMethodsecond_cursor_ascii

returns the position of the second cursor on the ascii view

src/doublehex.rs:200

↓ 1 callersMethodsecond_cursor_bars

returns the position of the second cursor on the bars view

src/doublehex.rs:206

↓ 1 callersMethodselection_file_ranges

(&self)

src/view/unaligned.rs:442

↓ 1 callersMethodset_no_memory_warn

(&mut self)

src/config.rs:176

↓ 1 callersFunctionsettings

( algo: &AlignAlgorithm, mode: InternalMode, text_len: usize, )

src/align/wfa2.rs:22

↓ 1 callersMethodshow_dialog

Setup a cursive instance and shows a dialog constructed through the callback given in `dialog`. Note that the settings are placed into the user_data

src/control.rs:227

↓ 1 callersFunctionspacer_background_color

(x: ByteData, rtl: bool)

src/style.rs:176

↓ 1 callersMethodsplit

split element into before the given offset and after if there are bits after the boundary

hexagex/src/lib.rs:609

↓ 1 callersMethodstart_align

This function starts the threads for the alignment, which send the data over the sender. It should then immediately return.

src/align.rs:292

↓ 1 callersMethodstart_search

(self, mut send: Sender, file: FileContent)

src/search.rs:312

↓ 1 callersMethodstart_selection

(&mut self, printer: &mut B)

src/view/aligned.rs:494

↓ 1 callersMethodstart_selection

(&mut self, printer: &mut B)

src/view/unaligned.rs:330

↓ 1 callersFunctionstyle

(siv: &mut Cursive)

src/dialog/style_settings.rs:76

← previous next →201–300 of 441, ranked by callers