hub / github.com/10XGenomics/longranger

github.com/10XGenomics/longranger @main

3,069 symbols 9,829 edges 379 files 716 documented · 23%

What it actually does AI analysis from the code graph — generated when you open this

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Extension points exported contracts — how you extend this code

Resetter resets a ReadCloser returned by NewReader or NewReaderDict to to switch to a new underlying Reader. This permit [4 …

lib/go/src/code.google.com/p/biogo.bam/bgzf/flate/inflate.go

HmmModel (Interface)

(no doc) [4 implementers]

lib/rust/hmm-bc-cnv/src/hmm.rs

HmmModel (Interface)

(no doc) [3 implementers]

lib/pvc/src/hmm.rs

Smer (Interface)

(no doc) [1 implementers]

lib/tada/src/cmd_msp.rs

Reader (Interface)

The actual read interface needed by NewReader. If the passed in io.Reader does not also have ReadByte, the NewReader wil

lib/go/src/code.google.com/p/biogo.bam/bgzf/flate/inflate.go

Strategy (FuncType)

(no doc)

lib/go/src/code.google.com/p/biogo.bam/index.go

TsvCallback (FuncType)

(no doc)

lib/go/src/loupe/formats/generic_tsv.go

Core symbols most depended-on inside this repo

lib/go/src/code.google.com/p/biogo.bam/record.go

join

called by 239

lib/tada/src/cmd_msp.rs

push

called by 152

lib/tada/src/bitenc.rs

exit

called by 145

tenkit/lib/python/tenkit/supernova.py

split

called by 131

lib/tada/src/cmd_msp.rs

clone

called by 121

lib/pvc/src/asm_caller.rs

write

called by 120

tenkit/mro/stages/bcl_processor/demultiplex/__init__.py

Shape

Function 1,597

Method 1,110

Class 212

Struct 108

TypeAlias 28

Enum 6

Interface 6

FuncType 2

Languages

Python52%

Go27%

Rust20%

C++1%

C1%

Modules by API surface

tenkit/lib/python/tenkit/bio_io.py90 symbols

tenkit/lib/python/tenkit/summary_manager.py67 symbols

lib/tada/src/kmer/mod.rs63 symbols

tenkit/lib/python/tenkit/bam.py61 symbols

lib/tada/src/bitenc.rs47 symbols

tenkit/lib/python/tenkit/hdf5.py43 symbols

lib/tada/src/cmd_sort_fastq.rs42 symbols

lib/python/longranger/sv/readpairs.py42 symbols

lib/python/longranger/sv/io.py38 symbols

tenkit/lib/python/tenkit/samplesheet.py33 symbols

lib/python/longranger/sv/utils.py32 symbols

lib/go/src/code.google.com/p/biogo.bam/bgzf/flate/inflate.go31 symbols

For agents

$ claude mcp add longranger \
  -- python -m otcore.mcp_server <graph>

⬇ download graph artifact